XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTT
TGTTCCCTTCTGAGCCCCATTTTTTAATGGGGTTGTTTGATTTTCTGAAG
TCCACCTTCTTGCGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGA
TTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTCTTTGTCT
TATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCC
CATTTGTCAATTCTCGATCTTACAGCATAAGCCATTGCTGTTCTGTTCAG
GAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCCT
CTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTGATCCATTTA
GATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCTTCT
ACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCTT
TCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAG
GTGTGTGAGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTG
TCTGTCTCTATACCAGTACCATGCAGTTTTTACCACAATTGCTCTGTAGT
AAAGCTTTAGGTCCGGCATGGTGATTCCACCAGAGGTTCTTTTATCCTTG
AGAAGAGTTTTTGCTATCCTAGGTTTTTTGTTAT

CTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCATATTTACAGAAAAGATGTTGAGTAATAA
AACATACATTTCACAATAGTGTATGCCTACTGAGAGAAAATAGATTTCAG
AATGACATCTACCTGATCAGGAAACTTGTGCTCTTCTGTATCTCAGGATG
CCATTCTAAAAACTCAAGTGAATTAGAATTTGGTACCCTCATATCCAGTA
AGGGAGGAAGACAAGGAATTAGAACAAAGGTACCTCCTTAAGAGTAATTC
TATCTCTTTGTTCCTAAGGCAACAGAAAATGCAACATAAAAGAAGAGATA
TAATCCTGAAAAAGATGGTGTGGGAAATGTGTACTTTAAGTCCACATAGG
TGCCAGAAAATCAGGGAGGGTGGAGGTGCAGGGATATTTGTATAGAGCTT
TCATTTTGCAGTTACAGGGGTGTTGGACTCAGAGACCTGGCAGGAGATGT
GAGGACTGAGTGTAAAAATATTATACCATTAGATTAAGAGATGGTGGGTT
TAGTAACTCAGCTTTATTCCCACTGACATTCTCCTATAAAACAAACAAAA
CAAAAACTACAAGCATGTCCCCACTACTCAAGATTTTGCCTCTCTTATGT
TTATCCAAGACTTAAGAAACAACCTTTCTAGACCAAATTCAAAAGATTGG
TATCTCAGAAAAAAAGTGCACATGACTTACGCATGCTCTGTCTCAGACTT
CTTTGGTCTATA

Query= MSMg01no512_e10.g1 MSMg01no512_e10.g1 CHROMAT_FILE:
MSMg01no512_e10.g1 PHD_FILE: MSMg01no512_e10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:22 2005
         (587 letters)



>mm_chr1_117632329_117633315
          Length = 987

 Score = 1120 bits (579), Expect = 0.0
 Identities = 585/587 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   catatttacagaaaagatgttgagtaataaaacatacatttcacaatagtgtatgcctac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catatttacagaaaagatgttgagtaataaaacatacatttcacaatagtgtatgcctac 260

                                                                       
Query: 61  tgagagaaaatagatttcagaatgacatctacctgatcaggaaacttgtgctcttctgta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagagaaaatagatttcagaatgacatctacctgatcaggaaacttgtgctcttctgta 320

                                                                       
Query: 121 tctcaggatgccattctaaaaactcaagtgaattagaatttggtaccctcatatccagta 180
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcgcaggatgccattctaaaaactcaagtgaattagaatttggtaccctcatatccagta 380

                                                                       
Query: 181 agggaggaagacaaggaattagaacaaaggtacctccttaagagtaattctatctctttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agggaggaagacaaggaattagaacaaaggtacctccttaagagtaattctatctctttg 440

                                                                       
Query: 241 ttcctaaggcaacagaaaatgcaacataaaagaagagatataatcctgaaaaagatggtg 300
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 ttcctaaggcaacagaaaatgcaacataaaagaagagatatgatcctgaaaaagatggtg 500

                                                                       
Query: 301 tgggaaatgtgtactttaagtccacataggtgccagaaaatcagggagggtggaggtgca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgggaaatgtgtactttaagtccacataggtgccagaaaatcagggagggtggaggtgca 560

                                                                       
Query: 361 gggatatttgtatagagctttcattttgcagttacaggggtgttggactcagagacctgg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggatatttgtatagagctttcattttgcagttacaggggtgttggactcagagacctgg 620

                                                                       
Query: 421 caggagatgtgaggactgagtgtaaaaatattataccattagattaagagatggtgggtt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caggagatgtgaggactgagtgtaaaaatattataccattagattaagagatggtgggtt 680

                                                                       
Query: 481 tagtaactcagctttattcccactgacattctcctataaaacaaacaaaacaaaaactac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagtaactcagctttattcccactgacattctcctataaaacaaacaaaacaaaaactac 740

                                                          
Query: 541 aagcatgtccccactactcaagattttgcctctcttatgtttatcca 587
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagcatgtccccactactcaagattttgcctctcttatgtttatcca 787


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space:   563729
Effective search space used:   563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)