Query= MSMg01no512_i22.b1 MSMg01no512_i22.b1 CHROMAT_FILE:
MSMg01no512_i22.b1 PHD_FILE: MSMg01no512_i22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:45 2005
(654 letters)
>mm_chr1_190986050_190987104
Length = 1055
Score = 1195 bits (618), Expect = 0.0
Identities = 645/654 (98%), Gaps = 1/654 (0%)
Strand = Plus / Plus
Query: 2 aggaacccagaatacaatgagttcccatccatactgatagatggtcgtggcaggtgtgta 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aggaacccagaatacaatgagttcccatccatactgatagatggtcgtggcaggtgtgta 261
Query: 62 gaggactggttcttggtccttgggcttgcatctgaagactcagattgtctctgacagact 121
||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 262 gaggaatggttcttggtccttggccttgcatctgaggactcagattgtctctgacagact 321
Query: 122 ggctcttgtctctgctctgtgcccttccctactagggctcaaaacataagatgtatcacc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ggctcttgtctctgctctgtgcccttccctactagggctcaaaacataagatgtatcacc 381
Query: 182 ttcaagtggccaagatcctttggctccttcagtgctttgcataattatgtctgtgaccca 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttcaagtggccaagatcctttggctccttcagtgctttgcataattatgtctgtgaccca 441
Query: 242 gtggctcagccaagtctccattttgtgtcctccaggtcacagatggatcactgaagaagc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gtggctcagccaagtctccattttgtgtcctccaggtcacagatggatcactgaagaagc 501
Query: 302 tgggatgataatcccagcctttacagtctgccagaactcgagttttgtaatgtgtaaatt 361
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 502 tgggatgataatcccagcctttacaatctgccagaactcgagttttgtaatgtgtaaatt 561
Query: 362 ccctgacttctcttacttatggatttgtgattttagttcctgctcatctacttcctgctt 421
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 562 ccctgacttctcttacttatggatttgtgattttagctcctgctcatctatttcctgctt 621
Query: 422 cctcattccttggagtatcttaggaaactgaatagctataaaataaggacagttgtattt 481
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 cctcattccttgaagtatcttaggaaactgaatagctataaaataaggacagttgtattt 681
Query: 482 accctatgtagttgttttgagaagtatttacgtccatgtatataaaagttttacaaattt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 accctatgtagttgttttgagaagtatttacgtccatgtatataaaagttttacaaattt 741
Query: 542 gacttctggagagtactctactatacattatgtacacataaagtctacagaaagttataa 601
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gatttctggagagtactctactatacattatgtacacataaagtctacagaaagttataa 801
Query: 602 agtaatatatatgcatttataatatatatacgcatttctttcttt-tttttttt 654
||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 802 agtaatatatatgcatttataatatatatacgcatttctttctttctttttttt 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1055
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1045
Effective search space: 672980
Effective search space used: 672980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no512_i22.g1 MSMg01no512_i22.g1 CHROMAT_FILE:
MSMg01no512_i22.g1 PHD_FILE: MSMg01no512_i22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:45 2005
(610 letters)
>mm_chr1_191132134_191133143
Length = 1010
Score = 1164 bits (602), Expect = 0.0
Identities = 608/610 (99%)
Strand = Plus / Minus
Query: 1 tcctcccgcaggagcttactctcaccaagctagaagaaccagggcttccttttaaataaa 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 937 tcctcccgcaggagcttactctcaccaagctagaagaaccagggcttcgttttaaataaa 878
Query: 61 aggcttaaatgttggcaccttttccttaaatgcctattttgaaaacaaaattaaaaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 aggcttaaatgttggcaccttttccttaaatgcctattttgaaaacaaaattaaaaaata 818
Query: 121 tattttagctcaaattgtttctagtagtgctcaataaattaaaaggttatatgacccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 tattttagctcaaattgtttctagtagtgctcaataaattaaaaggttatatgacccttc 758
Query: 181 ttagaaaatccactctggggaaacctagaaaatgctcatttttctaatccctgagcttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 ttagaaaatccactctggggaaacctagaaaatgctcatttttctaatccctgagcttag 698
Query: 241 tatgatttaatgatccatgttttgtattcaaaatgcaaatatagtcacatttacataaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 tatgatttaatgatccatgttttgtattcaaaatgcaaatatagtcacatttacataaaa 638
Query: 301 tcataactattatatgaagaaaaagggtgacagatatagatttagagcatgtaatgttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 tcataactattatatgaagaaaaagggtgacagatatagatttagagcatgtaatgttca 578
Query: 361 ccagtacttagagaagagaaattgattgtgggatataacactgacatttttctatttctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ccagtacttagagaagagaaattgattgtgggatataacactgacatttttctatttctt 518
Query: 421 ttttaaaattatgtatgtacctcatttttaacccctgggacttgaagtaggatagacaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ttttaaaattatgtatgtacctcatttttaacccctgggacttgaagtaggatagacaga 458
Query: 481 caagtaccgagcccacatggtcatacaacttctgaaaaacaaatttcatatacaaataca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 caagtaccgagcccacatggtcatacaacttctgaaaaacaaatttcatatacaaataca 398
Query: 541 cttccaccattagaggctagaaatatatgaattagaacaaagtatttgttttcaagtcat 600
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cttcccccattagaggctagaaatatatgaattagaacaaagtatttgttttcaagtcat 338
Query: 601 gaacatacaa 610
||||||||||
Sbjct: 337 gaacatacaa 328
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
