Query= MSMg01no513_p17.b1 MSMg01no513_p17.b1 CHROMAT_FILE:
MSMg01no513_p17.b1 PHD_FILE: MSMg01no513_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:41 2005
(599 letters)
>mm_chr1_170206531_170207529
Length = 999
Score = 1158 bits (599), Expect = 0.0
Identities = 599/599 (100%)
Strand = Plus / Minus
Query: 1 aactaggctggcccagagacctacctgtctccataccactgcccttatctctaggagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 aactaggctggcccagagacctacctgtctccataccactgcccttatctctaggagcac 901
Query: 61 atcatgaccacatgcatgaccacatccagcttttacatgtgtgctagggatccaatttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 atcatgaccacatgcatgaccacatccagcttttacatgtgtgctagggatccaatttca 841
Query: 121 agtctttatgagagtatcttacctaccaaatcatctctctaatgtagcttctgccctcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 agtctttatgagagtatcttacctaccaaatcatctctctaatgtagcttctgccctcga 781
Query: 181 ggacaggatcaggcctgtgtacacaagatggacaaaggaaaaaaaaatacatttgaatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ggacaggatcaggcctgtgtacacaagatggacaaaggaaaaaaaaatacatttgaatca 721
Query: 241 gttttcttctatcctccttcttcagccccatcaggaatctatgcacaattctctgctttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gttttcttctatcctccttcttcagccccatcaggaatctatgcacaattctctgctttt 661
Query: 301 ggtcatattactgctttgtcctttatttgcacactgcttgctggctctagtggatgtgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ggtcatattactgctttgtcctttatttgcacactgcttgctggctctagtggatgtgta 601
Query: 361 tcttagtcccgggtgactccttcgtttccttgaagatgagtgtggccatcacaaagggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tcttagtcccgggtgactccttcgtttccttgaagatgagtgtggccatcacaaagggtg 541
Query: 421 tacagcctctgcccaggtcttctttctttggactggaggtccatagtctatacctaacgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tacagcctctgcccaggtcttctttctttggactggaggtccatagtctatacctaacgg 481
Query: 481 ctacagcccaacacagtggcatggaccttgaagagttatacatagatggctttctagtga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ctacagcccaacacagtggcatggaccttgaagagttatacatagatggctttctagtga 421
Query: 541 ccctgtaagttgtgagcagagaatttctaggggggaaaccatccaatctgtctcaaggg 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ccctgtaagttgtgagcagagaatttctaggggggaaaccatccaatctgtctcaaggg 362
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no513_p17.g1 MSMg01no513_p17.g1 CHROMAT_FILE:
MSMg01no513_p17.g1 PHD_FILE: MSMg01no513_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:41 2005
(556 letters)
>mm_chr1_170085809_170086764
Length = 956
Score = 1019 bits (527), Expect = 0.0
Identities = 550/561 (98%), Gaps = 8/561 (1%)
Strand = Plus / Plus
Query: 3 gggcacag-ttttttagggatctagagagttgacctgacctgaaatcgtagggagccaag 61
|||||||| |||||| |||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 203 gggcacagatttttt-gggatctagaaagttgacctgacctgaaatcatagggagccaag 261
Query: 62 tttttagaggcacactctttccacttctatctggaggctgccagttttccctagccttgc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tttttagaggcacactctttccacttctatctggaggctgccagttttccctagccttgc 321
Query: 122 ttgaccacagagacctggtggctgccacattggaggtgacagtgggcatggagaacagac 181
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttgaccacagagatctggtggctgccacattggaggtgacagtgggcatggagaacagac 381
Query: 182 tgctggctacatgttgaaccttcaggaggcctaatgaagtgctgggtaggtgggcctctc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tgctggctacatgttgaaccttcaggaggcctaatgaagtgctgggtaggtgggcctctc 441
Query: 242 agcacagccactgcctagagagaagcattctgtgagggtggcactgctgtggcctgatcc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 agcacagccactgcctagagagaagcattctgtgagggtggcactgctgtggcctgatcc 501
Query: 302 actcatgtcccttcatgtgttccatccagagctggggtcactcttgtttccaagagaacc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 actcatgtcccttcatgtgttccatccagagctggggtcactcttgtttccaagagaacc 561
Query: 362 cttcagcaaatcttataatgtgctttatggaaaatgatgtggtccaaccattgttctgag 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 cttcagcaaatcttataatgtgctttatggaaaatgatgtggtccaaccattgttctgag 621
Query: 422 agtggtttcaatgtattcctgccacaaagacaaaaatcaccggttctcatcactaccaca 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 agtggtttcaatgtattcctgccacaaagacaaaaatcaccggttctcatcactaccaca 681
Query: 482 cacacacacacacacacacacacacacacacac------ttgtattgtcccttctaggca 535
||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 682 cacacacacacacacacacacacacacacacacacacacttgtattgtcccttctaggca 741
Query: 536 cgcgttctgagcatggcagag 556
|||||||||||||||||||||
Sbjct: 742 cgcgttctgagcatggcagag 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
