Query= MSMg01no515_o12.b1 MSMg01no515_o12.b1 CHROMAT_FILE:
MSMg01no515_o12.b1 PHD_FILE: MSMg01no515_o12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:25 2005
(563 letters)
>mm_chr1_26896440_26897401
Length = 962
Score = 1048 bits (542), Expect = 0.0
Identities = 554/558 (99%), Gaps = 1/558 (0%)
Strand = Plus / Plus
Query: 6 gaattccacaacaaggtcttcaaagttgtaattctaacaatttcccaaatgatgtttaca 65
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccacaacaagg-cttcaaagttgtaattctaacaatttcccaaatgatgtttaca 264
Query: 66 ttgtcaaataaattatatttggacaacagatgtcctacacatgatagtttatccatatct 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgtcaaataaattatatttggacaacagatgtcctacacatgatagtttatccatatct 324
Query: 126 agtcctcccacctgtattcatgtgaaattaaattcataaaggaaaattcttaacactgta 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtcctcccacctgtattcatgtgaaattaaattcataaaggaaaattcttaacactgta 384
Query: 186 taatgtgaaaattttatcaaatttaatggagtttttgtgcttttgccttgacttattata 245
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taatgttaaaattttatcaaatttaatggagtttttgtgcttttgccttgacttattata 444
Query: 246 tcttgttttgtttagtttggttgtcatctcttggagttatgctactttctaaagagatat 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcttgttttgtttagtttggttgtcatctcttggagttatgctactttctaaagagatat 504
Query: 306 agacagggaatggatctggggaagaagggatgtaaggggggctggaaggagttgagggag 365
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 505 agacagggaatggatctggggaagaaggtatgtaaggggggctggaaggagttgagggag 564
Query: 366 gggaaactgtggaataaatgtgttgtatgagagaagaatccattttcagttaaaaataag 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gggaaactgtggaataaatgtgttgtatgagagaagaatccattttcagttaaaaataag 624
Query: 426 ttgtgtatattaaagtggattaattgtgtccattgtagttgtatagtgtaacaatgcttc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttgtgtatattaaagtggattaattgtgtccattgtagttgtatagtgtaacaatgcttc 684
Query: 486 agagacattaaagtaataattacatactgaaaacatataaaaaagcaatgtataatgata 545
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 685 agagacattaaagtaataattacatactgaaaacatataaaaaagcaatgtagaatgata 744
Query: 546 tcctgagatataaaatgt 563
||||||||||||||||||
Sbjct: 745 tcctgagatataaaatgt 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 962
Length adjustment: 10
Effective length of query: 553
Effective length of database: 952
Effective search space: 526456
Effective search space used: 526456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_o12.g1 MSMg01no515_o12.g1 CHROMAT_FILE:
MSMg01no515_o12.g1 PHD_FILE: MSMg01no515_o12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:25 2005
(687 letters)
>mm_chr1_27074740_27075826
Length = 1087
Score = 1290 bits (667), Expect = 0.0
Identities = 682/687 (99%)
Strand = Plus / Minus
Query: 1 tttcttcatatttttattacctttcttatttccttatatattttgtaatctcaagcaagt 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1014 tttcttcatatttttattacctttcttatttccttatatcttttgtaatctcaagcaagt 955
Query: 61 gctcattttcttctttaattgtttgcctatataatatataattatatttatatttatact 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 954 gctcattttcttctttaattgtttgcctatataatatataatcatatttatatttatact 895
Query: 121 tattatagtgtagagcggccaaagtctagagtgaatgtataatattgacatgagcaagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 tattatagtgtagagcggccaaagtctagagtgaatgtataatattgacatgagcaagac 835
Query: 181 catatcaatgagcccaaatcatcagatcttgtaggcaaagccatcccaaagttaggctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 catatcaatgagcccaaatcatcagatcttgtaggcaaagccatcccaaagttaggctca 775
Query: 241 gaagaatggcaaaggtttatgttggtcaaaatatagatttttattaacatttgaaattta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 gaagaatggcaaaggtttatgttggtcaaaatatagatttttattaacatttgaaattta 715
Query: 301 aaacccatctgtaagggaaagtttcaactacagctgtatttacacaaaaatataactaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 aaacccatctgtaagggaaagtttcaactacagctgtatttacacaaaaatataactaat 655
Query: 361 atgactaacaaataaatcttgatagttgccattataactatttgttacatattcattata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 atgactaacaaataaatcttgatagttgccattataactatttgttacatattcattata 595
Query: 421 tcctttcattactttcatatatatactttataattattaaaagatttactataaaacagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tcctttcattactttcatatatatactttataattattaaaagatttactataaaacagt 535
Query: 481 atgccctgttgcatcttcagcaattttcagacatctgcgcaattcgtgtactgattatct 540
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 534 atgccctgttgcatcttcagcaattttcagacatctgtgcaatacgtgtactgattatct 475
Query: 541 catttttctcacattgtttgctccatctagcttttgaagcaaagttcactgttaagttga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 474 catttttctcacattgtttgctccatctagcttttgaagcaaagttcactgttaaattga 415
Query: 601 ggcaaataggttatgtaatagtccatacactgtagatttgtatactcaactctaagatgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ggcaaataggttatgtaatagtccatacactgtagatttgtatactcaactctaagatgt 355
Query: 661 ttgcacaacaatgaaattgcttaatgg 687
|||||||||||||||||||||||||||
Sbjct: 354 ttgcacaacaatgaaattgcttaatgg 328
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space: 729129
Effective search space used: 729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
