Query= MSMg01no516_c08.b1 MSMg01no516_c08.b1 CHROMAT_FILE:
MSMg01no516_c08.b1 PHD_FILE: MSMg01no516_c08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:45 2005
(633 letters)
>mm_chr1_76621898_76622933
Length = 1036
Score = 1195 bits (618), Expect = 0.0
Identities = 628/632 (99%), Gaps = 3/632 (0%)
Strand = Plus / Minus
Query: 5 gaattctccaaaaagtaatgcaggtgtctaggtcaaatgcaaataaagggatatgcaaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 gaattctccaaaaagtaatgcaggtgtctaggtcaaatgcaaataaagggatatgcaaat 777
Query: 65 tgagatatacttgactacaaaatcagatgcttaaaaacatttcaggaaagtgaagttttc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tgagatatacttgactacaaaatcagatgcttaaaaacatttcaggaaagtgaagttttc 717
Query: 125 gtctcacaaaattcacccggtcctcattataatacgtttcccatttgtgccattcattca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 gtctcacaaaattcacccggtcctcattataatacgtttcccatttgtgccattcattca 657
Query: 185 gcacactaaatgcatgatggggctccagttaagtagatttagaagctgattatactgcat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gcacactaaatgcatgatggggctccagttaagtagatttagaagctgattatactgcat 597
Query: 245 taaatgtattcacttcaattttagcagga--ttttttcccttaaaaggattacaagacca 302
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 596 taaatgtattcacttcaattttagcaggattttttttcccttaaaaggattacaagacca 537
Query: 303 aaaaagtagaaagtgagacagaaaataaaatacccctttggtgaggctctcagaagatca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 aaaaagtagaaagtgagacagaaaataaaatacccctttggtgaggctctcagaagatca 477
Query: 363 gcaaatagaaggcttcatgatattatataagaacgtgcattcccacttatccaattgaaa 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gcaaatagaaggcttcatgatattatataagaacgtgcattcccacttatccaattgaaa 417
Query: 423 taactaaatatatatttcagtttcattaattgactttatcctgcctgtgacacttctgta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 taactaaatatatatttcagtttcattaattgactttatcctgcctgtgacacttctgta 357
Query: 483 cacatgattcatttgtacctgggtttgcatttctctcaaaatacccaattttttgttatg 542
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 cacatgattcattcgtacctgggtttgcatttctctcaaaatacccaattttttgttatg 297
Query: 543 aatttgttcttaagccttataggatatacgaaatagt-aaaaaaaaaaagtgaggcagta 601
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 296 aatttgttcttaagccttataggatatacgaaatagtaaaaaaaaaaaagtgaggcagta 237
Query: 602 gggatgtgaaaagaagtcttgaaggtacaaaa 633
||||||||||||||||||||||||||||||||
Sbjct: 236 gggatgtgaaaagaagtcttgaaggtacaaaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1036
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1026
Effective search space: 639198
Effective search space used: 639198
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_c08.g1 MSMg01no516_c08.g1 CHROMAT_FILE:
MSMg01no516_c08.g1 PHD_FILE: MSMg01no516_c08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:45 2005
(668 letters)
>mm_chr1_76480292_76481359
Length = 1068
Score = 1220 bits (631), Expect = 0.0
Identities = 655/667 (98%), Gaps = 7/667 (1%)
Strand = Plus / Plus
Query: 1 tcttgaggtcaacgcagagaccccaggcaaatgctcagaggcatcaggtgccttggtctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttgaggtcaacgcagagaccccaggcaaatgctcagaggcatcaggtgccttggtctg 260
Query: 61 tcattaataccatgcccagccacatctggtcctgagagaaggtgggctgaagcgtttcag 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcattcataccatgcccagccacatctggtcctgagagaaggtgggctgaagcgtttcag 320
Query: 121 ttgctcctctggtctccagccttacggagctgctatgaaattagacaccagtgaattgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgctcctctggtctccagccttacggagctgctatgaaattagacaccagtgaattgtt 380
Query: 181 caggacatgttttggacaagtaaactcaaccataaaattataaatactagtcatctgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caggacatgttttggacaagtaaactcaaccataaaattataaatactagtcatctgaag 440
Query: 241 ctctgaatggttgagagcaatagctaattaagtagatggtgcagtgcgttttatttgcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 ctctgaatggttgagagcaatagctaattaagtagatggtgcagtgcgttttacttgcag 500
Query: 301 aacgccttgttggagagacagaggcttctaggctggcatcaggtcagcacagaatcttct 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatgccttgttggagagacagaggcttctaggctggcatcaggtcagcacagaatcttct 560
Query: 361 tctcggggggggggggggaaacagacttcatcttgcaatccacgatgctctgaaatttct 420
|||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 tctcgggggga-------aaacagatttcatcttgcaatccacgatgctctgaaatttct 613
Query: 421 aatttgaggctctgtgaagagatgcacaatctggtgcttcatgctccatggttggatcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aatttgaggctctgtgaagagatgcacaatctggtgcttcatgctccatggttggatcca 673
Query: 481 ctcaggcccatctgctcactgggaaagactggaggatgctttccttttggtattttaatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ctcaggcccatctgctcactgggaaagactggaggatgctttccttttggtattttaatt 733
Query: 541 tcaggtgtaggtgtttcaaaaaaggcagctactaaaatgagtcttcttgagatatgtgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 tcaggtgtaggtgtttcaaaaaaggcagctactaaaatgagtcttcttgagatatgtgat 793
Query: 601 gtaaatgtttaagtcaagcgacaggatgggtttggctagcaattcataccatctagtgct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 gtaaatgtttaagtcaagcgacaggatgggtttggctagcaattcataccatctagtgct 853
Query: 661 ccctgca 667
|||||||
Sbjct: 854 ccctgca 860
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
