Query= MSMg01no516_c20.b1 MSMg01no516_c20.b1 CHROMAT_FILE:
MSMg01no516_c20.b1 PHD_FILE: MSMg01no516_c20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:48 2005
(662 letters)
>mm_chr1_163767548_163768609
Length = 1062
Score = 1272 bits (658), Expect = 0.0
Identities = 658/658 (100%)
Strand = Plus / Minus
Query: 5 gaattcctagtggtactttatattagctttccttttgtgtagcaaatatattaatatatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 gaattcctagtggtactttatattagctttccttttgtgtagcaaatatattaatatatt 803
Query: 65 agaccattttattttcttttaagaatggcaaatatcaattagtaaagagtaacaaatgat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 agaccattttattttcttttaagaatggcaaatatcaattagtaaagagtaacaaatgat 743
Query: 125 gccttttagtttttgaagaacactaagctaactgttaacttcaaagttagccattttact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gccttttagtttttgaagaacactaagctaactgttaacttcaaagttagccattttact 683
Query: 185 tcctcattttccaataactttttggtctagaagcatattaatcatgtaatattatgcaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tcctcattttccaataactttttggtctagaagcatattaatcatgtaatattatgcaaa 623
Query: 245 atttataatatcaaataaggaataatgttcattctttatagttgtgatcatgtgcagtca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 atttataatatcaaataaggaataatgttcattctttatagttgtgatcatgtgcagtca 563
Query: 305 tgtctttcaaagaaaacttagatttaaaagaaaaaactcctcattagcaaatgtatttga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tgtctttcaaagaaaacttagatttaaaagaaaaaactcctcattagcaaatgtatttga 503
Query: 365 ccttttccttctgccctgagagactacaactctttatttgttacagtaaaatattttatg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ccttttccttctgccctgagagactacaactctttatttgttacagtaaaatattttatg 443
Query: 425 gtatagtttttaaacattgaactcaatgtgggcatctttcttaaaataggaaataaaagt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gtatagtttttaaacattgaactcaatgtgggcatctttcttaaaataggaaataaaagt 383
Query: 485 atatctgagaatgccactgccacaactgaacctaaaatgactgaatcaactcgtgtttca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 atatctgagaatgccactgccacaactgaacctaaaatgactgaatcaactcgtgtttca 323
Query: 545 actcctgttccatcacctgagtaagttatgctacgacagtagatttctgttaaaacagtg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 actcctgttccatcacctgagtaagttatgctacgacagtagatttctgttaaaacagtg 263
Query: 605 gagtgtattagaaagagaaagaaaagagcttgtcatctgtatacagtcatcatctgta 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gagtgtattagaaagagaaagaaaagagcttgtcatctgtatacagtcatcatctgta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_c20.g1 MSMg01no516_c20.g1 CHROMAT_FILE:
MSMg01no516_c20.g1 PHD_FILE: MSMg01no516_c20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:48 2005
(671 letters)
>mm_chr1_163611836_163612906
Length = 1071
Score = 1214 bits (628), Expect = 0.0
Identities = 659/672 (98%), Gaps = 8/672 (1%)
Strand = Plus / Plus
Query: 1 actctcagtcactgcccatctcggggcgtagtaatggggtgatgggcgagcaacgaatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 actctcagtcactgcccatctcggggcgtagtaatggggtgatgggcgagcaacgaatca 261
Query: 61 ggagctgtcacgccacatcaggtgctgaaacgtcatgctgccggctatataagcagcgcc 120
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 262 ggagctgtcacgccacatcaggtgctgaaacgtcacgctgcgggctatataagcagcgcc 321
Query: 121 attttccgggtccggggtcctcctgagaagtaagcaataaagctttgctgtagaagattc 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 attttccgggttcggggtcctcctgagaagtaagcaataaagctttgctgtagaagattc 381
Query: 181 cggttgtcctgagtgtgttcttgccagcg-gggacaaaagctcgggcaatactagctgat 239
||||||||||||||||||||||||| | | ||||||||||||| ||||||||||||||||
Sbjct: 382 cggttgtcctgagtgtgttcttgcc-g-gagggacaaaagctcaggcaatactagctgat 439
Query: 240 atagtaggactccgaaaaaataaactctagagtttactaatttataactgatgaccatgg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atagtaggactccgaaaaaataaactctagagtttactaatttataactgatgaccatgg 499
Query: 300 ttgttgatagactcttttgttatttgtagaaatcatctaaacctttaagtgtatacctaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttgttgatagactcttttgttatttgtagaaatcatctaaacctttaagtgtatacctaa 559
Query: 360 tgattttaacaactagaggtacagggttggagaaatacctcagtgctaagagagtatagt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgattttaacaactagaggtacagggttggagaaatacctcagtgctaagagagtatagt 619
Query: 420 gctctttcagagaatcaaagttcccagcatccatgtcagatggctcacaacatcttctgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gctctttcagagaatcaaagttcccagcatccatgtcagatggctcacaacatcttctgt 679
Query: 480 aactccagctccattgaaacctggcctatataggaacctgtacttgtgtgcacggagcca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 680 aactccagctccattgaaacctggcctatataggaacctgtacttgtgtgcacagagcca 739
Query: 540 caaacagacacacgcacatatacacataatcttttaaattaaattaaattaaattaaatt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 caaacagacacacgcacatatacacataatcttttaaattaaattaaattaaattaaatt 799
Query: 600 aaattaaattaaatctttttaaaaaataattggagttataattctaaaagttgtaacttt 659
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 aaattaaat-----ctttttaaaaaataattggagttataattctaaaagttgtaacttt 854
Query: 660 aaaaaaatagaa 671
||||||||||||
Sbjct: 855 aaaaaaatagaa 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
