XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTC
TAATAATACAGCACTTGGCACACCTGTGGGACCACTTCAAGAAAGGATTA
ACTGTGAGAGTATCATCCTTCCAGAGCGGGAGAGCACTGTATGGTGGCTC
AGCTGGAAAGATGTCCAAGAAAAGAGTAGGGCTCTATGTTTGCCTGCCTT
GGCTTCCTGTAGTGAGTGCAACTATTTTAACTAATACATGAACCCAGCTT
CTTCAGTGTTCTAAGGTGAACTGGTGACCACCAGTCCTTCAGGAATGCCC
AAGGGCTTTGATAATTAATTGGGACTTCAGAGTCACCCAGCATCAAGGAC
AGAGCTACTGCTGAGGTATCTGTATGCACTCTGTTGGAGCTGAGAATTAA
ACTTCTTGGCATGTATCATATAAGCCAGTAAACTAGATCCTTTTAAAAAA
TGCAGATTCATCCTCTTGGTTCAATTTATCTAGAGAATTCTAAATGCTAT
AATGATTTCTGTTAACCACCTTTTCTATGTTCTTCTTGCACTGCTATTGA
TATGTATGAGGAAAAAACAGAAGCATTAACTTTTGTGTGCTGCTCTTTCT
TTTTAATTGTTCATTTTCTTTTTATTCTCTGAAGATTTCATATTTGCTTA
GACTCTGTCTTGATTCCTGATTTCTTCAGTATGTGTTCTTGCTTCTGGTC
CCAATCTGGCAGTGGCTCCTTTCTACCCAAGTATACCGAGATG

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTGTGAAACTAGATGTTCCTTGATGTAATGAT
TCTTAAACAATTAAAAGTTGAGGCATAGGGGTACAGCTCAGCACAGTTCT
TGCAGTGTGATCTCATCTTGGAAACAATGCAATAGCTGCACAATGGTAGT
TCCAGATTAAGGTTTGACTTGCAAAGAAAGTTTGAAGAAATTATTAGAAA
ATGAAATAAAGCCAACATGGGGATGTCAAGGAAGGAAAAAAACTATTGAA
GTTAAGAAATAATTTTTGCACTATATTTAAGAGTGGTTCCTGGATACAAA
GTACAGTATGCATAAAAGTATATATTAGTAAAACTAAATCAAAACACAAG
GACTCTTAGGAGAATCATTGTGTGCAATTTACAGAAGCAGAAATCTAGTG
GAACTACTGAGTTAAGGGTTAACTTGATTCTTTCTGGCCCCTGCCTGTCA
GCTTTGCTCATGTTATTTATCATTAGAGCTTCACAAGAAAATACAAGTAG
CTGACCTCAGAGCTCTGAGATCTGAAGTATAGTAACTCAACAGATGAAGT
TTAAATACTGATAAATTTGCAATTATTATTTTGTCTACAAGCCTAGGAAT
AGGGGAAGCTTAAAACATTGGGTAACAACTGTAATTCTTGATTCTTTGTG
GGATGTGGTTACTATTTTGAATATGATTATACAATGGCTTTTTTAAC

Query= MSMg01no517_k08.b1 MSMg01no517_k08.b1 CHROMAT_FILE:
MSMg01no517_k08.b1 PHD_FILE: MSMg01no517_k08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:49:48 2005
         (693 letters)



>mm_chr1_115430513_115431605
          Length = 1093

 Score = 1075 bits (556), Expect = 0.0
 Identities = 565/568 (99%)
 Strand = Plus / Minus

                                                                        
Query: 126  tccaagaaaagagtagggctctatgtttgcctgccttggcttcctgtagtgagtgcaact 185
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 tccaagaaaagagtagggccctatgtttgcctgccttggcttcctgtagtgagtgcaact 1034

                                                                        
Query: 186  attttaactaatacatgaacccagcttcttcagtgttctaaggtgaactggtgaccacca 245
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1033 attttaactaatacatgaacccagcttcttcagtgttccaaggtgaactggtgaccacca 974

                                                                        
Query: 246  gtccttcaggaatgcccaagggctttgataattaattgggacttcagagtcacccagcat 305
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973  gtccttcaggaatgcccaagggctttgataattaattgggacttcagagtcacccagcat 914

                                                                        
Query: 306  caaggacagagctactgctgaggtatctgtatgcactctgttggagctgagaattaaact 365
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 913  caaggacagagctactgctgaggtatctgtatgcactctgttggagctgagaattgaact 854

                                                                        
Query: 366  tcttggcatgtatcatataagccagtaaactagatccttttaaaaaatgcagattcatcc 425
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853  tcttggcatgtatcatataagccagtaaactagatccttttaaaaaatgcagattcatcc 794

                                                                        
Query: 426  tcttggttcaatttatctagagaattctaaatgctataatgatttctgttaaccaccttt 485
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793  tcttggttcaatttatctagagaattctaaatgctataatgatttctgttaaccaccttt 734

                                                                        
Query: 486  tctatgttcttcttgcactgctattgatatgtatgaggaaaaaacagaagcattaacttt 545
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733  tctatgttcttcttgcactgctattgatatgtatgaggaaaaaacagaagcattaacttt 674

                                                                        
Query: 546  tgtgtgctgctctttctttttaattgttcattttctttttattctctgaagatttcatat 605
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673  tgtgtgctgctctttctttttaattgttcattttctttttattctctgaagatttcatat 614

                                                                        
Query: 606  ttgcttagactctgtcttgattcctgatttcttcagtatgtgttcttgcttctggtccca 665
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613  ttgcttagactctgtcttgattcctgatttcttcagtatgtgttcttgcttctggtccca 554

                                        
Query: 666  atctggcagtggctcctttctacccaag 693
            ||||||||||||||||||||||||||||
Sbjct: 553  atctggcagtggctcctttctacccaag 526


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space:   739689
Effective search space used:   739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)