Query= MSMg01no518_h08.b1 MSMg01no518_h08.b1 CHROMAT_FILE:
MSMg01no518_h08.b1 PHD_FILE: MSMg01no518_h08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:52 2005
(632 letters)
>mm_chr1_93841552_93842583
Length = 1032
Score = 1164 bits (602), Expect = 0.0
Identities = 623/630 (98%)
Strand = Plus / Plus
Query: 3 tgtgtcagttttaccacaagcatttggggttcccagggttatgtgacatcaccttcattc 62
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 203 tgtgtcagttttaccacaagcatttggggctcccagggttatgtgacatcaccttcattc 262
Query: 63 taacctgaagctcattctaactgggtctctgttgtgtgcagctataaacacaaggagcta 122
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 taacctgaagctcattccaactgggtctctgttgtgtgcagctataaacacaaggagcta 322
Query: 123 ggaatgtcaacaaggggtcttcatcaacatagcaggagggaactcacatggtgctcactg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggaatgtcaacaaggggtcttcatcaacatagcaggagggaactcacatggtgctcactg 382
Query: 183 tactttagccctcaaaaactttatgtgactgacccactgaagactactgtgcaggccaat 242
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tactttaaccctcaaaaactttatgtgactgacccactgaagactactgtgcaggccaat 442
Query: 243 gtccccgactctgcctggcagtactagtggggcagtgcagaacccgaatctaagcattgc 302
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gtccccaactctgcctggcagtactagtggggcagtgcagaacccgaatctaagcattgc 502
Query: 303 tcctgagtcacaagatatatgatagctgagtaaagaggtcccagcccagccctaagctga 362
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tcctgagtcacaggatatatgatagctgagtaaagaggtcccagcccagccctaagctga 562
Query: 363 aagctcggcttgtgcatgctgactccacccaagcctgcagacaagctcccatagacacct 422
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aagctcggcttgtgcatgctgactccacccaagcctgcagacaagctcccatagacaccg 622
Query: 423 gaccacactggagagctgaggagcagcatgaggcctggccagcacgttatcctccacacg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gaccacactggagagctgaggagcagcatgaggcctggccagcacgttatcctccacacg 682
Query: 483 agtgaaacgggaagggagaacgtgctgcagcgagtgcctctgtgtcctggccccgctctg 542
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 agtgaaacaggaagggagaacgtgctgcagcgagtgcctctgtgtcctggccccgctctg 742
Query: 543 tgtcccttctgctcatctcttagccaaggtcagacatcctacccgggctgggatacagct 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tgtcccttctgctcatctcttagccaaggtcagacatcctacccgggctgggatacagct 802
Query: 603 gtagccccgtgctgggtgaactgcccctca 632
||||||||||||||||||||||||||||||
Sbjct: 803 gtagccccgtgctgggtgaactgcccctca 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_h08.g1 MSMg01no518_h08.g1 CHROMAT_FILE:
MSMg01no518_h08.g1 PHD_FILE: MSMg01no518_h08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:52 2005
(623 letters)
>mm_chr1_94018148_94019172
Length = 1025
Score = 1091 bits (564), Expect = 0.0
Identities = 586/594 (98%), Gaps = 2/594 (0%)
Strand = Plus / Minus
Query: 32 gtcacagaagttagtactctgacttgcatagatttaaactcttcaaatgaggggaaactt 91
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 gtcacggaagttagtactctgacttgcatagatttaaactcttcaaatgaggggaaactt 966
Query: 92 ggagttctttgggttttttatttgtttgttttgttttgttttaaagatttatttatttat 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 ggagttctttgggttttttatttgtttgttttgttttgttttaaagatttatttatttat 906
Query: 152 tataagtacactgtagctgttttcagacacaccagaagagggcgccagatctcgttacgg 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 tataagtacactgtagctgttttcagacacaccagaagagggcgccagatctcgttacgg 846
Query: 212 atggttgtgagccacggtttggttgctgggaattgaactcaggacctttggaagaacagt 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 atggttgtgagccacggtttggttgctgggaattgaactcaggacctttggaagaacagt 786
Query: 272 cagtgctcttaaccgctgagccatctctccagccctgatcttggagttcttacgagtgat 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 cagtgctcttaaccgctgagccatctctccagccctgatcttggagttcttacgagtgat 726
Query: 332 aggtttgggcctgtcaaacagaggacaggagtgcatttttccatggttgggagtatggga 391
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 725 aggtttgggcctgtcaaacagaggacaggagtgcatttttccatggttgggagcatggga 666
Query: 392 agccctgtgtccacacgacacatcctgaggctgccccacatgggtccttgtggtcttgat 451
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ggccctgtgtccacacgacacatcctgaggctgccccacatgggtccttgtggtcttgat 606
Query: 452 gcaagccctatatttactgatgtattcccccggcctgtgagagagatgctgctttcttgg 511
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 605 gcaagccctatatttactgatgtattgccccggcctgtgagagagatgctactttcttgg 546
Query: 512 ctccttaaatcaagc--ttttttttttcttcccacacacttatttaaatttaattataaa 569
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 545 ctccttaaatcaagcttttttttttttcttcccacacacttatttaaatttaattacaaa 486
Query: 570 atactattaaaaatgcacaactctcattttccccatgtaaaaaagcaatacacc 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 atactattaaaaatgcacaactctcattttccccatgtaaaaaagcaatacacc 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1025
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1015
Effective search space: 622195
Effective search space used: 622195
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
