Query= MSMg01no518_l02.b1 MSMg01no518_l02.b1 CHROMAT_FILE:
MSMg01no518_l02.b1 PHD_FILE: MSMg01no518_l02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:10 2005
(610 letters)
>mm_chr1_83790102_83791111
Length = 1010
Score = 603 bits (312), Expect = e-176
Identities = 324/328 (98%), Gaps = 1/328 (0%)
Strand = Plus / Minus
Query: 5 gaattcaacaaagttctctgaattagagaccatcagttttgtgacattatgaacataatt 64
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 340 gaattcaacaaagttctctgaattagagaccatcagttttgtgacatcatgaacataatt 281
Query: 65 ttcttaacgtgatggatcaaacagctaaggtcctttgtgttaacatctttattatatgat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ttcttaacgtgatggatcaaacagctaaggtcctttgtgttaacatctttattatatgat 221
Query: 125 gtactcattagttatggtggttccaatgaaaaatgtcttccataaactcacatattgaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gtactcattagttatggtggttccaatgaaaaatgtcttccataaactcacatattgaaa 161
Query: 185 cactggtccctagttcatagttggtggctgcatttggggtagtttggattcctaatgaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 cactggtccctagttcatagttggtggctgcatttggggtagtttggattcctaatgaga 101
Query: 245 tgaagtgttgatggaggaagcttgtcagtggggatagaatctgaggacttatgtgcttgc 304
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 100 tgaagtgttgatggaggaagcttgtcggtggggatagaatctgaggacttatgtgcttgc 41
Query: 305 ttgctctctcctcttctctctctctctc 332
| |||||||||||| |||||||||||||
Sbjct: 40 tcgctctctcctct-ctctctctctctc 14
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_l02.g1 MSMg01no518_l02.g1 CHROMAT_FILE:
MSMg01no518_l02.g1 PHD_FILE: MSMg01no518_l02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:10 2005
(645 letters)
>mm_chr1_83608072_83609116
Length = 1045
Score = 1193 bits (617), Expect = 0.0
Identities = 636/645 (98%), Gaps = 6/645 (0%)
Strand = Plus / Plus
Query: 1 tcaaccacacatggatcatctatagcataccccttcctcccagctctcagggacactcaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tcaaccacacatggatcatctatagcataccccttcctcccagctctcagggacactca- 260
Query: 61 cagttgagggagtagaaaggttataagaaccaaagtcttggaggagtacgtgaaacagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagttgagggagtagaaaggttataagaaccaaagtcttggaggagtacgtgaaacagta 320
Query: 121 tcttctgggtatgacaggaccatgaactcaaagcaactatgggtatgtgcataagatcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 321 tcttctgggtatgacaggaccatgaactcaaagcaactatgggtatgtgcacaaaatcaa 380
Query: 181 gccagtcagcatctcaacatggaggacgtcgtggactagctgttgacatgtaagtttcta 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 gccagtcagcatctcaacatggaggacgtcgtggactatctgttgacatgtaagtttcta 440
Query: 241 aggacaacacagttggtgaatgattggtccttctactctaatcttagtcttaaagccaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggacaacacagttggtgaatgattggtccttctactctaatcttagtcttaaagccaga 500
Query: 301 agaataagccttgaatgcttaatcacactgcaaaaacaaaacaaaacaaaacaaaacaaa 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaataagccttgaatgcttaatcacactgcaaaaacaaaacaaaacaaaacaaa----- 555
Query: 361 caaaacaaaacctagtagtgtccactcctgaggagagaatttgaatgctcatatttctaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 caaaacaaaacctagtagtgtccactcctgaggagagaatttgaatgctcatatttctaa 615
Query: 421 gtttccgaaggaagtaaccattatatcaaccttatccttcacttcctcagttttaaagca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gtttccgaaggaagtaaccattatatcaaccttatccttcacttcctcagttttaaagca 675
Query: 481 ccatgccaacttctgagaggttggtacatgccaggcttgactctaaacacttcatcactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ccatgccaacttctgagaggttggtacatgccaggcttgactctaaacacttcatcactt 735
Query: 541 attccatctgcaaggggagaggtggagaaaaagtaatggaaaacaaaagtacccatttac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 attccatctgcaaggggagaggtggagaaaaagtaatggaaaacaaaagtacccatttac 795
Query: 601 taatctttctctctcatctgtcaagataatcaccatctatgccaa 645
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 taatctttctctctcatctgtcaagataatcaccatctatgccaa 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
