Query= MSMg01no518_p09.b1 MSMg01no518_p09.b1 CHROMAT_FILE:
MSMg01no518_p09.b1 PHD_FILE: MSMg01no518_p09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:32 2005
(670 letters)
>mm_chr1_82368278_82369347
Length = 1070
Score = 1236 bits (639), Expect = 0.0
Identities = 663/671 (98%), Gaps = 3/671 (0%)
Strand = Plus / Plus
Query: 1 ctatcttcagctgacaaaatcacacccctgccagagcatgagacaaatcataattagcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ctatcttcagctgacaaaatcacacccctgccagagcatgagacaaatcataattagcta 261
Query: 61 caaaaacagccccacaccggacacctgggatcaaaacacaaacataatcacataagattt 120
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 262 caaaaacagccccacaccagacacctggggtcaaaacacaaacataatcacataagattt 321
Query: 121 ttgtggctttaaaaaaaatcaaaattctcgccacagcatgtgttcacattgtatactgtt 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttgtggctttaaaaaaa-tcaaaattctcgccacagcatgtgttcacattgtatactgtt 380
Query: 181 tagtcataccagttaacaatggccatagattagatttgaggctggaagccttttgtagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagtcataccagttaacaatggccatagattagatttgaggctggaagccttttgtagga 440
Query: 241 agtaccaaatagctaacattttaggctttattgtccatgtggctctagtctaactggcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtaccaaatagctaacattttaggctttattgtccatgtggctctagtctaactggcca 500
Query: 301 cccttttcttatatcatgagagcaggcattgtcttatgaaagtaaaccacgtgttggatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cccttttcttatatcatgagagcaggcattgtcttatgaaagtaaaccacgtgttggatt 560
Query: 361 cagacagtgggttgtagtttagttttgttttgattcctggtttacttaggttcctataac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 561 cagacagtgggttgtagtttagttttgttttgattcctggtttacttaggttcctgtaac 620
Query: 421 agatacaaagaattgttattaattcatatctgatggttgatcttgactgtcagtcggact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agatacaaagaattgttattaattcatatctgatggttgatcttgactgtcagtcggact 680
Query: 481 caattgagatctgcctaaaggatcagtaaagggcatatctaggcatgtctgtgaggtcat 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 681 caattgagatctgcctaaaggatcagtaaagggcatatctaggcatgcctgtgaggtcat 740
Query: 541 gtccatactcaattaactgaacgg-gcacaaccttctttgaatgtgggtgttaacgtcca 599
|||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 741 gtccatacacaattaactgaa-ggagcacaaccttctttgaatgtgggtgttaacgtcca 799
Query: 600 gtaggctaaagaccccttgaaataaaagaagagaaataatgaagcccaccaggataggct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gtaggctaaagaccccttgaaataaaagaagagaaataatgaagcccaccaggataggct 859
Query: 660 ttctccctccc 670
|||||||||||
Sbjct: 860 ttctccctccc 870
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_p09.g1 MSMg01no518_p09.g1 CHROMAT_FILE:
MSMg01no518_p09.g1 PHD_FILE: MSMg01no518_p09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:32 2005
(656 letters)
>mm_chr1_82531967_82533022
Length = 1056
Score = 1222 bits (632), Expect = 0.0
Identities = 647/652 (99%)
Strand = Plus / Minus
Query: 1 attgagctatttcacttactgcctaaaaatgttctaaacagcaggggcatagtggggaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 attgagctatttcacttactgcctaaaaatgttctaaacagcaggggcatagtggggaca 966
Query: 61 tgcctttataggaaagagtcttaggcaggcaggtttctgagctccagagcagcctaaact 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 tgcctttataggaaagagttttaggcaggcaggtttctgagctccagagcagcctaaact 906
Query: 121 aaatagccaattcctggttagccactgctacatattgataccttgtctcataagtcagcc 180
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 905 aaatagccaattcctggttagccactgctacatattgataccttgtctcaaaagtcagct 846
Query: 181 agctagccaagcaaccagccaaacaaaatgggagcagtttcaccaaagggaagctgctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 agctagccaagcaaccagccaaacaaaatgggagcagtttcaccaaagggaagctgctgt 786
Query: 241 gaagtttgaaaaaagccttagaagatcatacaagctcttctttgatacaaataccgaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 gaagtttgaaaaaagccttagaagatcatacaagctcttctttgatacaaataccgaaat 726
Query: 301 gggccgagtaattaaattgaaaaattacatacttttaagagtaatgccttgtattatagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gggccgagtaattaaattgaaaaattacatacttttaagagtaatgccttgtattatagt 666
Query: 361 atgagaaaaacgtagtctttctaccccataattagtaactgaccattggtgagtggtcgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 665 atgagaaaaacgtagtctttctaccccataattagtaactgaccattggtgagtggttgg 606
Query: 421 tctaattgaatggctgagtacaggtgtatgaaaaccttggacctcaggctgataacaatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tctaattgaatggctgagtacaggtgtatgaaaaccttggacctcaggctgataacaatc 546
Query: 481 aaggagaccataattccatcccagtgaaatggctacagtgctttttactggtgactaata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aaggagaccataattccatcccagtgaaatggctacagtgctttttactggtgactaata 486
Query: 541 tttcatatagaagagaaaatactgaaatggcagtctactttttcctaagtgaatgtctcc 600
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 485 tttcatatagaagagaaaatactgaaatggcagcctactttttcctaagtgaatgtctcc 426
Query: 601 ttttcagggtcagcctggggaaaatggagaaaaaggaagatctgtgtacatt 652
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttttcagggtcagcctggggaaaatggagaaaaaggaagatctgtgtacatt 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
