XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTTCC
TATTCCAGACAGTGATCTATCAAATGAGCTGGTTCTGCCACACCAGGGGA
GGCAGAAAGTGAGTCTTGTTACCTTTCTCCTATGGCACGTGCAAGGGAAG
AGGTCATCCTCGGATTGTGGCTCTACCCTCTTCATACCCTCTCGAATTTG
GGGCTCGCTCACTTGTAAATTTGCATAGCCCTGTTAAATAGCAATACAAA
AGCATTTCTTAGGCAGCTTTTAAAATATGCTCATCAAATGAGACAAGCTG
TAAAGTATCAGGAAAGTATTCATTTAATGCATATGTACCTAACAGTGACC
CACAGTGTCCTCCATATCTGTTTTAAATGCTCAATCCCCTTTGTGCTGTG
AACACTGGCAACCAATTCCTAATATACCCCTTATTAGTGTACTCATGTGT
GTGTGTAATGTATATGTTGGTATATGAAGACCAGAATCAGACATCATATA
CCTTGCTGAGCCACTCTCCACATTATTTTTAGAGGCAGGGTCTCTCTCAG
TGAACCTGGAGTCCACTGACTGACTAAATTCGCTGGCTACCAGCCCCGGG
GGAATTTTCTTATTTCTGCTTTCCAGTGCTGGCATTACAGATAATTTTTG
CCACAAATAGATACTCTTTATGCTTGTAAAGCCAGCACTTTATCCGCTGA
GCTATCTATCTGCTTAGCCCTATCTTGTTTTGAATTT

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAGTAGGAATTCAGTGAGAAGGTTATCTATTCAGT
AACATTCAAAATTACTTCTAGTAGAGACAGTGAAACTAATTAGGCATTAC
AAAGAACAGAGCTGAAATAGTCTGCAGAGTGTTTACTTGGGACAATAGCC
AGTCTTACCCAGATAAGGGAATTCATAATGGCCTAGCGAATAGGTGGGTT
TACCATGAAAGATTTATGGAATCCCCCTGAGACAGGTTTCTTCACTAGGC
CCAAAGAAACAGCATAAATCAGGCATTTACTAAGAACCCCTGGTGGTGGG
TTTAACAATAGACTAGCAATACACCTGGCTCCCTTCTTAGTGGCAGCGGC
CTGGTCCCTGCCTCCTTTTGATGTATACATTCCTTATGTTTTATGTCACT
GTAACTTGGTGGATGTATCTCGCCTAGTTCCTAGTTTCCTGTTATTCTTC
TGTATTTCCCAGCACTCAAGAGGCTGAGGCAGGTGGATTTCTGAGTTCAA
GACCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTATACAGA
GAAACCCTGTCTTGAAAACCAAAAGAAAAAAAAAAGTTTGATGCTCGACT
TGACAAATTACATTCAGATTCTACACAATCTCCTGTGTTGCATCTGTCTG
CCATTCACTTCACTGACTCCTTGTCCACCTGCAAC

Query= MSMg01no519_a13.b1 MSMg01no519_a13.b1 CHROMAT_FILE:
MSMg01no519_a13.b1 PHD_FILE: MSMg01no519_a13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:38 2005
         (700 letters)



>mm_chr1_44164323_44165422
          Length = 1100

 Score = 1330 bits (688), Expect = 0.0
 Identities = 694/696 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccttcctattccagacagtgatctatcaaatgagctggttctgccacaccagggg 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttcctatttcagacagtgatctatcaaatgagctggttctgccacaccagggg 264

                                                                       
Query: 65  aggcagaaagtgagtcttgttacctttctcctatggcacgtgcaagggaagaggtcatcc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aggcagaaagtgagtcttgttacctttctcctatggcacgtgcaagggaagaggtcatcc 324

                                                                       
Query: 125 tcggattgtggctctaccctcttcataccctctcgaatttggggctcgctcacttgtaaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcggattgtggctctaccctcttcataccctctcgaatttggggctcgctcacttgtaaa 384

                                                                       
Query: 185 tttgcatagccctgttaaatagcaatacaaaagcatttcttaggcagcttttaaaatatg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttgcatagccctgttaaatagcaatacaaaagcatttcttaggcagcttttaaaatatg 444

                                                                       
Query: 245 ctcatcaaatgagacaagctgtaaagtatcaggaaagtattcatttaatgcatatgtacc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctcatcaaatgagacaagctgtaaagtatcaggaaagtattcatttaatgcatatgtacc 504

                                                                       
Query: 305 taacagtgacccacagtgtcctccatatctgttttaaatgctcaatcccctttgtgctgt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taacagtgacccacagtgtcctccatatctgttttaaatgctcaatcccctttgtgctgt 564

                                                                       
Query: 365 gaacactggcaaccaattcctaatataccccttattagtgtactcatgtgtgtgtgtaat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaacactggcaaccaattcctaatataccccttattagtgtactcatgtgtgtgtgtaat 624

                                                                       
Query: 425 gtatatgttggtatatgaagaccagaatcagacatcatataccttgctgagccactctcc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtatatgttggtatatgaagaccagaatcagacatcatataccttgctgagccactctcc 684

                                                                       
Query: 485 acattatttttagaggcagggtctctctcagtgaacctggagtccactgactgactaaat 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acattatttttagaggcagggtctctctcagtgaacctggagtccactgactgactaaat 744

                                                                       
Query: 545 tcgctggctaccagccccgggggaattttcttatttctgctttccagtgctggcattaca 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tcgctggctaccagccccgggggaattttcttatttctgctttccagtgctggcattaca 804

                                                                       
Query: 605 gataatttttgccacaaatagatactctttatgcttgtaaagccagcactttatccgctg 664
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 805 gataatttttgccacaaatagatactctttatgcttgtaaagccagcactttatccactg 864

                                               
Query: 665 agctatctatctgcttagccctatcttgttttgaat 700
           ||||||||||||||||||||||||||||||||||||
Sbjct: 865 agctatctatctgcttagccctatcttgttttgaat 900


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 700
Length of database: 1100
Length adjustment: 10
Effective length of query: 690
Effective length of database: 1090
Effective search space:   752100
Effective search space used:   752100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)