TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TATGTTTGCTTCAATGCAGAACCGCAGTGGGAGAAACACTGCTGTAAAGA
GTGAGAGAGAAGAAAGAGAAGAAGAGCATGATGTTTATTGTGGAAACATA
AGCTCAGAAAACATGGTTGAGTTATCATAGAAAATGCAATGTAAGCCAAG
AATTCATGGAGTAGGTAGGGGTATAGCTGAGAGGTAGAGCACTGGCTTCT
CATATACAAGAGCTTGTTTTTGTCTTGAGCAAAACACACAGAGACCCAGA
CACTCACACTCAGACACATATCCATATGTGGCATGTATGGGAGATACATG
CATAGACACACAGGCACAGACACACACAGACACACATAGAGACACAGACA
CACAGACACACAGACACAGACACAGACACACACAGGCAGACACACATACA
GACAGACACATACACAAACACACAGATATACAGGCACACAAACACTCACA
CATAGACACAGACACAAAAACATAGACATAGACACACAGACACAGATACC
TAAACACAGCTACATACACACACAGACAGACATATAGACACATATCTATA
CACATATATACACACATAGAAGCACACAGATACAGACACATAAACACTAA
TACATACACAGACACAGACAGAAACACAGATACACACAGAAACAGACACA
GACACATATACAGGCACACACACATGCAGACAT

GGGGTGAGTTGCGTTTATTTCTTTTTTGAGAGCTCGTGGTGGGCGGCGGG
CCGGGGGCCCTTGAGTGAGTGGAGGTTTTNCAGAGGGGGGGCGGGGGAAG
TNNAACCCCAGAAGGAAAAAGGGGGGGTAAGGGCCCTGGGGGGGGGACCC
CCCCCGGGTTTCCCCCCCAAAAATTTTGGGGGGGACCCAACAATAATGTG
GCCCCCCCCCGNGAAAGAATCTTCCCCCCCTCGNTAANAAAAAAAAAAAC
CCCCCGGGGGGGCGTATTACCTTCTTTTTTTTTTCCGAAAAAAAAAAGGG
GGGGGGAGAAACCCCGCGGGGGGGGGGCGGGTGTTTAAAAAAGGGGGGGG
GTTTTTGTGTTTGGGCCCGGGGATTGGGGGAAAGAGGGGAGGGGCCCCCC
CTCCCCTGGTGACGGGGAATTTTTTTTTTTTTTGGGGGGGGGAGAGAAGC
CTCTTTTTATTTTTTGTGCGGGGGGGGGGGGGGGGAAACCCCCCCCCAAA
AAAAAGGGTGGGGCCCCCCAAAAAAAAAAAAAGCCCCCCATACCGGGGGG
GGGGGGGGAAAAAAAAAACCCCGCGGGAGGATTTTTTTTGTGGTGGGGGT
GCTCGGGGCCAGACCCCCCAACACAAAAAAATATAGTGTGGGGTTGGATA
CTATTCTCCCCCCCCCAAGAAAGAGAAAAAGAAAAGGGGGGTGAGGCGCC
CCCCCTGTGGTGGTGGAGGTAAGATAGTGTGCGGTTGGGCGTTTAGGTCG
TCTCCCCCN

Query= MSMg01no519_f04.b1 MSMg01no519_f04.b1 CHROMAT_FILE:
MSMg01no519_f04.b1 PHD_FILE: MSMg01no519_f04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:00 2005
         (654 letters)



>mm_chr1_145207433_145208486
          Length = 1054

 Score =  998 bits (516), Expect = 0.0
 Identities = 522/524 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctatgtttgcttcaatgcagaaccgcagtgggagaaacactgctgtaaagagtga 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gaattctatgtttgcttcaatgcagaaccgcagtgggagaaacactgctgtaaagagtga 465

                                                                       
Query: 65  gagagaagaaagagaagaagagcatgatgtttattgtggaaacataagctcagaaaacat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gagagaagaaagagaagaagagcatgatgtttattgtggaaacataagctcagaaaacat 405

                                                                       
Query: 125 ggttgagttatcatagaaaatgcaatgtaagccaagaattcatggagtaggtaggggtat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ggttgagttatcatagaaaatgcaatgtaagccaagaattcatggagtaggtaggggtat 345

                                                                       
Query: 185 agctgagaggtagagcactggcttctcatatacaagagcttgtttttgtcttgagcaaaa 244
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 344 agctgagaggtagagcactggcttctcatatacaagagcttgtttttgtcctgagcaaaa 285

                                                                       
Query: 245 cacacagagacccagacactcacactcagacacatatccatatgtggcatgtatgggaga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 cacacagagacccagacactcacactcagacacatatccatatgtggcatgtatgggaga 225

                                                                       
Query: 305 tacatgcatagacacacaggcacagacacacacagacacacatagagacacagacacaca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tacatgcatagacacacaggcacagacacacacagacacacatagagacacagacacaca 165

                                                                       
Query: 365 gacacacagacacagacacagacacacacaggcagacacacatacagacagacacataca 424
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 164 gacacacagacacagacacagacacacacaggcagacacacatacaggcagacacataca 105

                                                                       
Query: 425 caaacacacagatatacaggcacacaaacactcacacatagacacagacacaaaaacata 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 caaacacacagatatacaggcacacaaacactcacacatagacacagacacaaaaacata 45

                                                       
Query: 485 gacatagacacacagacacagatacctaaacacagctacataca 528
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44  gacatagacacacagacacagatacctaaacacagctacataca 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space:   672336
Effective search space used:   672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)