NAAAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAACAACTCACTTAAAGAAATACAGGAGAACACTGCTAAAG
AGTTACAAGTCCTTAAAGAAAAACAGGAAAACACTGCTAAAGAGTTACAA
GTCCTTAAAGAAAAACAGGAAAACACAACCAAACAGGTAGAAGTCCTTAT
AGAAAAACAGGAAAACACATCCAAACAGGTGATGGAAATGAACAAAACCA
TACTAGACCTAAAAAGGGAAGTAGACACAATAAAGAAAACCCAAAGTGAG
GCGACGCTGGAGATAGAAACCCTAGGAAAGAAATCTGGAACCATAGATGC
CAGCATCAGCAACAGAATACAAGAGATGGAAGAGAGAATCTCAGGTGCAG
AAGACTCCATAGAGAACATCGGCACAACAATCAAAGAAAATGGAAAATGC
AAAAAGATCCTAACTCAAAACATCCAGGAAATCCAGGACACAATGAGAAG
ACCAAACCTACGGATAATAGGAGTGGATGAGAATGAAGATTTTCAACTCA
AAGGACCAGCAAACATCTTCAACAAAATTATTGAAGAAAACTTCCCAAAT
CTAAAGAAAGAGATGCCCATGAACATACAAGAAGCCTACAGAACTCCAAA
TAGACTGGACCAGAAAAGAAATTCCTCCCGACACATAATAATCAGAACAC
CAAATGCACTAAATAAAGATAGAATACTAAAAGCAGTAAGGGAAAAAGGT
CAAGTAAC

AAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATGTCACCATTCTGGGTTGCTTAG
TGCTTCATGGGCCTCTTTATATGCTGAAAAGATTCCTTTGGATTTAGAGT
AAGATTTAAATAATCTCCTAAAACAACATATGCTCATCTCATAACTGTTA
CCAAACATATGTTCAGCATGGATAAGCCAGTAGCTATGATTTATGCAAGA
AAAGACGGCAGGATACAGTCCTCCGTTCTTCCCCCACACTCAGATTCTGT
GCAGATTCAGGTTGAAAAATAGACATGGAAATTTTGTCATCTTATCTATT
TGGGAACCTGAATAACTGAATCAGAATCTAACAAAGCCAATTAGCTGTTG
CTAGTTATAAGCTACTGGGAGAGGGGGAGTTGCTTTAGAGAAGGCTGTAA
CAACTAGTAGTTACCCATGCCTGAGTGGCTCTGCCCTCACCCATGGGTAC
ACAGAAATTTCTTTTGAAACTCAGTGAGTTATTTAAAAAAATAAGAAGAT
AACATGGAGTTGAGAGAGAGAGCTGTGTTGTTGGGGGAGAGCGGTGGGTC
CCCTGGAGAGTTTAAGGGAGGAAGGGAGGATGGACATGACCAACATACAC
TGCATGAATGTATGTAAATTTTAAAGAATAAATTGAGCTGAAGAGATGGC
TCAGTGGTTGAGAGGGCTTCCTGCTCTTCCAGAGGACCTGATTTTGA

Query= MSMg01no520_p18.g1 MSMg01no520_p18.g1 CHROMAT_FILE:
MSMg01no520_p18.g1 PHD_FILE: MSMg01no520_p18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:11 2005
         (671 letters)



>mm_chr1_131076815_131077884
          Length = 1070

 Score =  967 bits (500), Expect = 0.0
 Identities = 512/516 (99%), Gaps = 1/516 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgtcaccattctgggttgcttagtgcttcatgggcctctttatatgctgaaaagattcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 atgtcaccattctgggttgcttagtgcttcatgggcctctttatatgctgaaaagattcc 456

                                                                       
Query: 61  tttggatttagagtaagatttaaataatctcctaaaacaacatatgctcatctcataact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tttggatttagagtaagatttaaataatctcctaaaacaacatatgctcatctcataact 396

                                                                       
Query: 121 gttaccaaacatatgttcagcatggataagccagtagctatgatttatgcaagaaaagac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gttaccaaacatatgttcagcatggataagccagtagctatgatttatgcaagaaaagac 336

                                                                       
Query: 181 ggcaggatacagtcctccgttcttcccccacactcagattctgtgcagattcaggttgaa 240
           ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 335 ggcaggatacattcctccgttcttcccccacactcagattctgtgcagattcaggttg-a 277

                                                                       
Query: 241 aaatagacatggaaattttgtcatcttatctatttgggaacctgaataactgaatcagaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaatagacatggaaattttgtcatcttatctatttgggaacctgaataactgaatcagaa 217

                                                                       
Query: 301 tctaacaaagccaattagctgttgctagttataagctactgggagagggggagttgcttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 tctaacaaagccaattagctgttgctagttataagctactgggagagggggagttgcttt 157

                                                                       
Query: 361 agagaaggctgtaacaactagtagttacccatgcctgagtggctctgccctcacccatgg 420
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 agagaaggctgtaccaactagtagttacccatgcctgagtggctctgccctcacccatgg 97

                                                                       
Query: 421 gtacacagaaatttcttttgaaactcagtgagttatttaaaaaaataagaagataacatg 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 96  gtacacagaaatttcttttgaaactcagtgagttatttaaaaaaataagaagatgacatg 37

                                               
Query: 481 gagttgagagagagagctgtgttgttgggggagagc 516
           ||||||||||||||||||||||||||||||||||||
Sbjct: 36  gagttgagagagagagctgtgttgttgggggagagc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1070
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1060
Effective search space:   700660
Effective search space used:   700660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)