Query= MSMg01no521_c12.b1 MSMg01no521_c12.b1 CHROMAT_FILE:
MSMg01no521_c12.b1 PHD_FILE: MSMg01no521_c12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:24 2005
(675 letters)
>mm_chr1_20357415_20358489
Length = 1075
Score = 1212 bits (627), Expect = 0.0
Identities = 663/675 (98%)
Strand = Plus / Plus
Query: 1 gtttttatgctaaatatgaaaatgcaattaattataatgagaacttttttagcagtcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtttttatgctaaatatgaaaatgcaattaattataatgagaacttttttagcagtcttt 260
Query: 61 ataaggaatgtattcgtcttttcaaataatcaactctagcactaagcatcctcaaagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataaggaatgtattcgtcttttcaaataatcaactctagcactaagcatcctcaaagaga 320
Query: 121 atattacctagctatttcagtcctatgctaaaaaaaaggggggggtacgctaataattct 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 atattacctagctatttcagtcctatgctaaaaaaaaagggggggtacgctaataattct 380
Query: 181 ctgcctcagaaagaatccttatctctcagggggtgaacataagtgctcaatatatctgtc 240
||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 ctgcctcagaaagaatcctcatctctcaggaggtgaacataagtgctcaatatatctgtc 440
Query: 241 caaaacagtgagacaccatagtgtctggcattgctaatttccaattgtcagcaaatatca 300
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 taaaacagtgagacaccatagtgtctggcattgcttatttccaattgtcagcaaatatca 500
Query: 301 tacagatatcttccagaacatcctatagctacctctaccacatacatgtaagaccacacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacagatatcttccagaacatcctatagctacctctaccacatacatgtaagaccacacc 560
Query: 361 tctaactcaaaccatgatccacaagtacctaagaacaataaatagatcaaacaagaaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctaactcaaaccatgatccacaagtacctaagaacaataaatagatcaaacaagaaagc 620
Query: 421 tctaggggcaggaagatggtatgattaggagagttcttccatgcaaccatgaagacaaaa 480
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 621 tctaggggcaggaagatggtatgattagtacagttcttccatgcaaccatgaagacaaaa 680
Query: 481 gtcagatccccagcttccatgtaaaaagctttacatagcccctcatgctgtttgtgtttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 681 gtcagatccccagcttccatgtaaaaagctttacatagcccctcatgctgtttgtatttc 740
Query: 541 tagtgctgaaagtacattcaagagattcatttgggtttgttgaccaagtatcaactgaat 600
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 741 tagtgctgaaagtaaattcaagagattcacttgggtttgttgaccaagtatcaactgaat 800
Query: 601 aggtgtgctccaaaatctgtgaggtaccctacatcgataaacagcacagagggccagaaa 660
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 801 aggtgtgctccaaaatcagtgaggtaccctacgtcgataaacagcacagagggccagaaa 860
Query: 661 gttgaccagagtaca 675
|||||||||||||||
Sbjct: 861 gttgaccagagtaca 875
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space: 708225
Effective search space used: 708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_c12.g1 MSMg01no521_c12.g1 CHROMAT_FILE:
MSMg01no521_c12.g1 PHD_FILE: MSMg01no521_c12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:24 2005
(499 letters)
>mm_chr1_20526444_20527342
Length = 899
Score = 700 bits (362), Expect = 0.0
Identities = 386/396 (97%), Gaps = 4/396 (1%)
Strand = Plus / Minus
Query: 104 gttacttcaagcctgttttcactttagagttttgatcctattcaaaaaatcaattaatgg 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 gttacttcaagcctgttttcactttagagttttgatcctattcaaaaaatcaattaatgg 840
Query: 164 actatggattttgatttactatcttatttatttatttatttatttatttatttatttatt 223
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 839 actatggattttgatttactatc----ttatttatttatttatttatttatttatttatt 784
Query: 224 tatttatttaagagagggactcactgtttagcccagctagtctggagctctatttgatag 283
||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 783 tatttatttaagacagggactcactgtttagtccagctagtttggagctctatttgatag 724
Query: 284 tgatcttgaattcacaatatttgtttcactcttctgtgagttagggttacagccatataa 343
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 723 tgatcttgaattcacaatacttgtttcactcttctgtgagttagggttacaggcatataa 664
Query: 344 acttgatttagcttattgtattatagatgaaaaaattttcaggttacctgtcaaaaatta 403
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 663 acttgatttagcttattgtattatagatgaaaaaaatttcaggttacctgtcaaaaatta 604
Query: 404 atcttatatcttatttcttctctgtgaaaatgggactttcctcatgaaaatgatatgaat 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 atcttatatcttatttcttctctgtgaaaatgggactttcctcatgaaaatgatatgaat 544
Query: 464 attgaattaatatttaataaatatttactgagcagc 499
||||||||||||||||||||||||||||||||||||
Sbjct: 543 attgaattaatatttaataaatatttactgagcagc 508
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
