Query= MSMg01no521_f14.b1 MSMg01no521_f14.b1 CHROMAT_FILE:
MSMg01no521_f14.b1 PHD_FILE: MSMg01no521_f14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:39 2005
(656 letters)
>mm_chr1_127646884_127647939
Length = 1056
Score = 1212 bits (627), Expect = 0.0
Identities = 645/651 (99%)
Strand = Plus / Minus
Query: 6 gaattcagatctggtgtctagtacatgggtgtctggctctctggggattccttgcttcca 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 gaattcagatctggggtctagtacatgggtgtctggctctctggggattccttgcttcca 797
Query: 66 caccatcccacttacagttctctccagctccttcaatcctgaatacacatttgcacaagg 125
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 796 caccatcccacttacagttctctccagctccttcaatcctgagtacacatttgcacaagg 737
Query: 126 cacttcctctaaagtggtcttgctttagactctgggagctgtctgggagctgtgaatgaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 cacttcctctaaagtggtcttgctttagactctgggagctgtctgggagctgtgaatgaa 677
Query: 186 ggacaggacaaattctcctggtatgaagatgggtaataggaaacaagtccaccctctcct 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ggacaggacaaattctcctggtatgaagatgggtaataggaaacaagtccaccctctcct 617
Query: 246 tgtaaccttccctctctcacctcctacaggcctcagcttggagacttcccttgactttgg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tgtaaccttccctctctcacctcctacaggcctcagcttggagacttcccttgactttgg 557
Query: 306 gcatgctaccattctcttttttatatctctctaccctagtttattcttcctttgtctttc 365
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 556 gcatgctaccattctcttttttatatctctctaccatagtttattcttcctttgtctttc 497
Query: 366 cctttatttgctggcttttgtttgtgtgtccagggtggtggtacttgttttggtctttgt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cctttatttgctggcttttgtttgtgtgtccagggtggtggtacttgttttggtctttgt 437
Query: 426 ttcatttggagtctgcatctcatgcagccctgagtgccttcaaacttagccatgtagctg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ttcatttggagtctgcatctcatgcagccctgagtgccttcaaacttagccatgtagctg 377
Query: 486 agtataaccttctcctggctctaccacccaagtgctgatattataggcagttaataaggt 545
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 376 agtataaccttctcctggctctaccatccaagtgctgatattataggcagttaataaggt 317
Query: 546 gctagggtggaacctagggcttcctgaatgctaggtgttccagttttatttctagttgac 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gctagggtggaacctagggcttcctgaatgctaggtgttccagttttatttctagttgac 257
Query: 606 ttcagttgttgtgacaaagactcccaccaaaaacaaattatggaaagaagc 656
|||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 256 ttcagttgttgtgacaaagactccaaccaaaaacaaattagggaaagaagc 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_f14.g1 MSMg01no521_f14.g1 CHROMAT_FILE:
MSMg01no521_f14.g1 PHD_FILE: MSMg01no521_f14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:39 2005
(420 letters)
>mm_chr1_127508625_127509444
Length = 820
Score = 708 bits (366), Expect = 0.0
Identities = 409/430 (95%), Gaps = 15/430 (3%)
Strand = Plus / Plus
Query: 1 acagctgaagctaagcaggacaacccagaacagatggagcactggctggagcactggcaa 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 acagttgaagctaagcaggacaacccagaacagatggagcactggctggagcactggcaa 255
Query: 61 acatggtctcctattaggtaggttgtcttcactttggtacacaaaagttttaaactttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 acatggtctcctattaggtaggttgtcttcactttggtacacaaaagttttaaactttca 315
Query: 121 tgaagtttatttcatctgctttccatttgacttctggccttttcacatcatccctagaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tgaagtttatttcatctgctttccatttgacttctggccttttcacatcatccctagaca 375
Query: 181 cc-attgtaaaaatctgagacagtgaagactcatccctgtgttttcttgtaagcatttta 239
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cccattgtaaaaatctaagacagtgaagactcatccctgtgttttcttgtaagcatttta 435
Query: 240 ttatctggttcatgcaagtaggtctccgttcctactttgtgtgatggatg--g-gt---- 292
||| |||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 436 ttacctggttcatgcaagtaggtctccgttcctactttgtgtgatggatgatgtgtgatg 495
Query: 293 --aggtctcttgaaaaacttccacagaggagagaaataaaggcaaggtctatgaagaatc 350
|| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gaag-----ttgaaaaacttccacagaggagagaaataaaggcaaggtctatgaagaatc 550
Query: 351 aatgtgctgatcactgatcacaggttcacatccttcccagttctacctcgaggaattaat 410
|||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 551 aatgtgctgatcaccgatcacaggttcacacccttcccagttctacctcaaggaattaat 610
Query: 411 cctgcagata 420
||||||||||
Sbjct: 611 cctgcagata 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
