Query= MSMg01no526_c17.b1 MSMg01no526_c17.b1 CHROMAT_FILE:
MSMg01no526_c17.b1 PHD_FILE: MSMg01no526_c17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:00 2005
(630 letters)
>mm_chr1_125421107_125422138
Length = 1032
Score = 1147 bits (593), Expect = 0.0
Identities = 621/631 (98%), Gaps = 2/631 (0%)
Strand = Plus / Minus
Query: 1 atcagaattttacacttaaaaaacaatacagtttaaaatatctatattagttgatcctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 atcagaattttacacttaaaaaacaatacagtttaaaatatctatattagttgatcctgt 772
Query: 61 ataattaaaattatatgtaagcatggaattatttacaacacgagtttcctaataaagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 ataattaaaattatatgtaagcatggaattatttacaacacgagtttcctaataaagtga 712
Query: 121 caatagtgtcgactattggtaagacatttatgaaacaagaagatttcataagttctgttc 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 711 caatagtgtcgactattggtaagacatttgtgaaacaagaagatttcataagttctgttc 652
Query: 181 ccttaaagtcactgaatggcttaattggcccttattcttaaaggtaggtctctaatcatc 240
|||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||| |
Sbjct: 651 ccttaaagtcactgaatggcttaattggtcctaattcttaaaggtgggtctctaatcacc 592
Query: 241 ctgtttcttaggctatgaagcccagtgtttcccatgtctgcaatgtactcatttaaattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ctgtttcttaggctatgaagcccagtgtttcccatgtctgcaatgtactcatttaaattt 532
Query: 301 aaatgtaatgtgctgctgagaggaagattcaagaccatagcaagtagtgccttagccaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 aaatgtaatgtgctgctgagaggaagattcaagaccatagcaagtagtgccttagccaag 472
Query: 361 taatagagaaaattgaatttctcctgagcaatcttgtattatcttcttgttcagtatctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 taatagagaaaattgaatttctcctgagcaatcttgtattatcttcttgttcagtatctc 412
Query: 421 gtggtactttccgaaattgaattttctattttctttcttaactctcttcagttgcgattc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 411 gtggtactttccgaaattgaattttctattttctttcttaactctcttcagttgctattc 352
Query: 481 aagtcttcaagtatttcctacactgagactagatttttttttt--gtctctgtataggtc 538
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 351 aagtcttcaagtatttcctacactgagactagattttttttttttgtctctgtataggtc 292
Query: 539 aagaaagatagttaataccggtgtgttcaatcatgtctgttggttttttactatgatgta 598
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 291 aagaaagatagttaatacctgtgtgttccatcatgtctgttggttttttactatgatgta 232
Query: 599 acactagaagatgttgaagccttatacattt 629
|||||||||||||||||||||||||||||||
Sbjct: 231 acactagaagatgttgaagccttatacattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1032
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1022
Effective search space: 633640
Effective search space used: 633640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_c17.g1 MSMg01no526_c17.g1 CHROMAT_FILE:
MSMg01no526_c17.g1 PHD_FILE: MSMg01no526_c17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:00 2005
(665 letters)
>mm_chr1_125256384_125257449
Length = 1066
Score = 1203 bits (622), Expect = 0.0
Identities = 655/666 (98%), Gaps = 1/666 (0%)
Strand = Plus / Plus
Query: 1 agatctatctaagcagggaatgaggaaaggcaagcttcccagaaccaaagcagctttgaa 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatctatctaagcagggactgaggaaaggcaagcttcccagaaccaaagcagctttgaa 260
Query: 61 gtgtagtcctacccaacgtggaaccctgtgtttgcttctgtgactcctggcacagtgctg 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 gtgtagtcctacccaacgtggaaccctgtgtttccttctgtgactcctggcacagtgctg 320
Query: 121 atgttaagaagtataaaacttgctaacatcctgaaaacctgtaagagtctgacactccat 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 atgttaagaagtataaaacttgctaacatcctgaaaacctataagagtctgacactccat 380
Query: 181 ttgctcttaaaaattgaaagatccatctctctcttcagtgctcccacttgctatctctca 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgctcttaaaaattgaaagatccatctctctcttcagtgctcccacttgctatctctca 440
Query: 241 tggtagctctctttcctactgctctctaggttttgaaaggaaggctctctgcttcagggt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 tggtagctctctttcctactgctctctaggttttgaaaggaaggctctctgctttagggt 500
Query: 301 cctatgaccatggggttcttttctcaagtttcacacttcaagatataatttcagctgtca 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 cctatgaccatggggttcttttctcaagtttcacacttcaaggtataatttcagctgtca 560
Query: 361 aagattgtgagtccctctcctaataaatcttagctgaagagtaattttgtatcagctctt 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 aagattgtgagtccctctcctaatatatcttagctgaagagtaattttgtatcagctctt 620
Query: 421 ttctatgaacttttgctcat-caggccacattcaaatcttcaatatgtacttcaccttag 479
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 621 ttctatgaacttttgctcattcaggccacattcaaatcttcaatatgtacttctccttag 680
Query: 480 gtaaggcattgtgacaacttctagtagttatgccattctgttttccaacttatttaactg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtaaggcattgtgacaacttctagtagttatgccattctgttttccaacttatttaactg 740
Query: 540 gattctaggaatcaatttatcgataaaaatatggccatataaacacagatatttaatttt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gattctaggaatcaatttatcgataaaaatatggccatataaacacagatatttaatttt 800
Query: 600 attttacttcgctgtatcaaataaacagaaacagcaggccaaatgctagtgatgagcggt 659
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 801 attttacttcgccgtatcaaataaacagaaacagcaggccaaatgctagtgatgagcagt 860
Query: 660 ggctta 665
||||||
Sbjct: 861 ggctta 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1066
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1056
Effective search space: 691680
Effective search space used: 691680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
