Query= MSMg01no526_g02.b1 MSMg01no526_g02.b1 CHROMAT_FILE:
MSMg01no526_g02.b1 PHD_FILE: MSMg01no526_g02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:17 2005
(643 letters)
>mm_chr1_70421283_70422324
Length = 1042
Score = 721 bits (373), Expect = 0.0
Identities = 400/409 (97%), Gaps = 1/409 (0%)
Strand = Plus / Minus
Query: 4 ggaattccatgtacattgtgttctccactggaattggcatgtataaacttatttttcaat 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ggaattccatgtacactgtgttctccactggaattggcatgtataaacttatttttcaat 548
Query: 64 ttttgtagttctccataggtactactagagttagttgtgtacatttttgacttgttttcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ttttgtagttctccataggtactactagagttagttgtgtacatttttgacttgttttcc 488
Query: 124 tatgggaatacctatacactaactattatcaacatgtgaaggacatttggatttactggc 183
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 487 tatgggaatacctatatactaactattatcaacacgtgaaggacatttggatttactggc 428
Query: 184 aggagggagaataatctccaaagtctaatcagattgttgtggtcccctgacttcccacta 243
||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 427 aggagggagaacaatctccgaagtctagtcagattgttgtggtcccctgacttcccacta 368
Query: 244 agtgtgttagtgactcgatcactcacattcatttctacttttaatttaaattatagtata 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 agtgtgttagtgactcgatcactcacattcatttctacttttaatttaaattatagtata 308
Query: 304 tgggacttgttgcaaaacatctcagaccaagggctctatattaactctaaatgctcctga 363
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 307 tgggacttgttgcaaaacatctcaggccatgggctctatattaactctaaatgctcctga 248
Query: 364 cttcagatggccaaaaattctgtctatgccattctcctttatatctttt 412
||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 247 cttcagatggccaaaaa-tctgtctatgccattctcctttatatctttt 200
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1042
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1032
Effective search space: 653256
Effective search space used: 653256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_g02.g1 MSMg01no526_g02.g1 CHROMAT_FILE:
MSMg01no526_g02.g1 PHD_FILE: MSMg01no526_g02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:17 2005
(516 letters)
>mm_chr1_70268112_70269027
Length = 916
Score = 893 bits (462), Expect = 0.0
Identities = 503/517 (97%), Gaps = 2/517 (0%)
Strand = Plus / Plus
Query: 1 agtagaacaaagttacaaggtaaaggggaattcttggacacgatggtgctacactgttca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 agtagaacaaagttacaaggtaaaggggaattcttggacacgatggtgctacaccgttca 260
Query: 61 ttgagacaagtcattcagagatatatttgatacatttgacagagtatgttggctacccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgagacaagtcattcagagatatatttgatacatttgacagagtatgttggctacccaa 320
Query: 121 ctactgtaaaatcctagctttcctagaaaagttactccctcaaaacatgggaatctcctc 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctactgtaaaatcctagctttcatagaaaagttactccctcaaaacatgggaatctcctc 380
Query: 181 agccagcaggtgaggagaaagagtggagacatatcataggagcctctaggacagagaatg 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 agccagcaggtgaggagaaagagtggagacatatcataggagcctctgggacagagaatg 440
Query: 241 acttagctgaagcacaattggcaaaggagtgcagcataatgctctctagaggggttgtgg 300
||||||| || |||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 acttagcagacgcacaactggcaaaggagtgcagcataatgttctctagaggggttgtgg 500
Query: 301 aaggttccgggctaggactttcagacatcacctggctttatctcacttaggttgtttagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaggttccgggctaggactttcagacatcacctggctttatctcacttaggttgtttagt 560
Query: 361 tgcagacctagcaaaaggccaagatgatatcctgtcatgtggtagacctatggagataaa 420
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcagacctagcaaaaggctgagatgatatcctgtcatgtggtagacctatggagataaa 620
Query: 421 atatttcaaagtcctaccaaatctgactttgctgaatgacgactggngtag-agtagaat 479
||||||||||||||||||||||||||||||||||||||| |||||| || | ||||||||
Sbjct: 621 atatttcaaagtcctaccaaatctgactttgctgaatgatgactggggt-gcagtagaat 679
Query: 480 tcctactggaaccaggactgtgttgagaactgaggat 516
|||||||||| ||||||||||||||||||||||||||
Sbjct: 680 tcctactggagccaggactgtgttgagaactgaggat 716
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
