Query= MSMg01no526_i02.b1 MSMg01no526_i02.b1 CHROMAT_FILE:
MSMg01no526_i02.b1 PHD_FILE: MSMg01no526_i02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:27 2005
(563 letters)
>mm_chr1_165163040_165164002
Length = 963
Score = 978 bits (506), Expect = 0.0
Identities = 542/554 (97%)
Strand = Plus / Plus
Query: 1 ctttctgagcacttgagtccatgaaagtaactctttgaacccacagtgatgggggtccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttctgagcacttgagtccatgaaagtaactctttgaacccacagtgatgggggtccaa 260
Query: 61 gggttgatagcacaaggctatgcacatacaatgtcaatcatttcaatgaaaactgaaaaa 120
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 261 cggttgatagcacaaggctatacacatacaatgtcaatcattccaatgaaaactgaaaaa 320
Query: 121 ttcagtcaatcatctgggggatttatcctcatgacaccaaacatctggatgactgagtgt 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 ttcagtcaatcatctgggggatttatcctcatgacaccaaacatctggattactgagtgt 380
Query: 181 ttgcagttctcactagagcggtgtcctgtagaatcatacacctactatttaagatcagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgcagttctcactagagcggtgtcctgtagaatcatacacctactatttaagatcagca 440
Query: 241 atattgtgaggtccacttttacatagcatgctgcaaaaaggaacccaagagcataattca 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atattgcgaggtccacttttacatagcatgctgcaaaaaggaacccaagagcataattca 500
Query: 301 tttacttcttctctgggtagcattttaaaaggaagtacatgtgactagtcatgcttctca 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttatttcttctctgggtagcattttaaaaggaagtacatgtgactagtcatgcttctca 560
Query: 361 tacacgagaacaaacatatataaagtacccacagcctagtggtgaaagccaagcacgtta 420
||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||
Sbjct: 561 tacacgagaacaaacatatataaagaacccacagcctagtggtgaaagtcaagcaggttg 620
Query: 421 tgatggaagtccaaacaagaggacaatggaatccaatgcaaaaatgaactctgagagttt 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 621 tgatggaagtccaaacaagaggacaacggaatccaatgcaaaaatgaactctgagagttt 680
Query: 481 gcaaagcttcaaaaatggggtggcacttgatcaagatgccttacttaagtggagtaagtt 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acaaagcttcaaaaatggggtggcacttgatcaagatgccttacttaagtggagtaagtt 740
Query: 541 ctctttttttattt 554
||||||||||||||
Sbjct: 741 ctctttttttattt 754
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_i02.g1 MSMg01no526_i02.g1 CHROMAT_FILE:
MSMg01no526_i02.g1 PHD_FILE: MSMg01no526_i02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:27 2005
(655 letters)
>mm_chr1_165322948_165324002
Length = 1055
Score = 1031 bits (533), Expect = 0.0
Identities = 606/657 (92%), Gaps = 43/657 (6%)
Strand = Plus / Minus
Query: 40 ggctgcacatggatacagcaaaatactctgtgttaaactggtgttgcttgaagcttgagt 99
||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||
Sbjct: 1055 ggctgcacatggatacagc--aataccctgtgttaaactggtgttgcttgaggcttgagt 998
Query: 100 tgatgtaagggcagaaatggtgagagggagatgtgtagataactcagagagaggaacatt 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997 tgatgtaagggcagaaatggtgagagggagatgtgtagataactcagagagaggaacatt 938
Query: 160 tggtaaagatttttttttcccttctagaacaacttctcatgaagcataataaagatacaa 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937 tggtaaagatttttttttcccttctagaacaacttctcatgaagcataataaagatacaa 878
Query: 220 ctcacaggct--------------------------------------gct---ttatat 238
|||||||||| ||| ||||||
Sbjct: 877 ctcacaggctggcttatatttcaagcataataaagatacaactcacaggctggcttatat 818
Query: 239 ttcaagaaaagaacgaaattaataataccatctttttccctacaagtaattatacttttt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 ttcaagaaaagaacgaaattaataataccatctttttccctacaagtaattatacttttt 758
Query: 299 aaagaattctcttagtctttactaagagtagagactgtttattggggattttacaaatga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 aaagaattctcttagtctttactaagagtagagactgtttattggggattttacaaatga 698
Query: 359 atgtaggtgtattcaacttgctgtagtggtacacacctattatcctggtacttagaaggt 418
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 697 atgtaggtgtattcaacttgctgtagtggtacatacctataatcctggtacttagaaggt 638
Query: 419 agaggcaaaaaagtgtgagtgcaaagccagccttggccacattgtcccctatcttaccaa 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 agaggcaaaaaagtgtgagtgcaaagccagccttggccacattgtcccctatcttaccaa 578
Query: 479 gagtgtatagattccatacttctctgctgttgatttaagacggaataacatagatagaga 538
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 577 gagtgtatagattccatacttctctgctgttgatttaagacggaataacacagatagaga 518
Query: 539 cagcaatgtagggaagtgcaacaggattatattattaatagtggataatggagtacttaa 598
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 517 cagcaatgtagggaagtgcaacaggattatattactaatagtggataatgaagtacttaa 458
Query: 599 ggaagacctctgctggttagtgagtgtgggcagaaagggcagatctgtacctaatgc 655
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ggaagacctctactggttagtgagtgtgggcagaaagggcagatctgtacctaatgc 401
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
