XXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGGATCCGCGGAATTCAAC
AGCCATTTTGGAGGTTTCCCTCAGGCTGATGGAGGAAGAATTCTAGCTGA
GGAAAAGAATAAACTTAAGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCA
CTGGCTGCTCTTCCAGAGGTCTGAGTTCAATTCCCAGCAAGCTCATGGTG
GCTTACAACCATCTGTAATTGGATATGATGCCCTCTTCTGGTGTGTCAGC
AACAGCATGCTCATAGATAGATAGATAGATAGGTAGGTAGGTAGATAGAT
AGATAGATAGATAGATAGATAGATAGATAGATAGATAATAAATTTAANGA
TCCANATTTATGAAAGACTGTTGTATCTGGGAAATGAAAATTGTTTGTTT
ATTTTTCTGATGAAGGGTATGTTGATGCTTTGCTCTACCTAATTGTCTCC
TTTTTTCTCATTGTTTTTATGCCTTACGTTTCTGTATAGGTTGGTTTTAT
AGTGAATTATGTTCATGGAATTTTTTGTATACTTTTGTTTCTTGAGTTCT
CACTTTATTCTATGGTTTTTACACTCTTTTGGTTTGTTGTATCTATTCCA
CTTTTTCGCTTTTTTTTTATGCTCGTTAATATTCCTGATTTTTATACACA
TTTTTTTCCTCGGCTCCATTGTTCTTCACCCTGATCTATTTTTTCGCACT
ATTTTTTTTGATATTACACAACTATGCATTATACCCGGATTTGTTGTCGT
CTTTTTCTGTAAGACTCTTAGAGATTACGCGATTGTTTTCCTATCTCGTA
N

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCAGGATAGCCAGGGCTCACTTAACACCCAACCCC
ACCCCCAAGTAAAGCCGATGTTTTACTTACACATGTACACAGGCACACTC
ACCTCTCAGATGCAGATGAATAGAGCCCTTTGGGAAAAGACTACGGTGAC
TGAAGTCAGTGCTCGTGCAACGTGCTGTTGACTTTGTATTAGTAAATACA
GTCCCACGTCTCGACTGTCTGAACGGCGTGTATGATTTATCCTTTGGTTA
GTTTCCAGTAGTCTTCAGTTCCTGATGTGTATGGGTTTTGTTCCTTGTTG
GAGTTTCAGCCACTGATGCTTCTTCCACTTTGATAAAGACCTTTTTGCTT
GGCTCACTTTCCCTGTCTCAGTGCAATCCGTATCCTTGATAGCAGGGCCC
ACTGAAGGGCACTGAGAGCTAGCTTTCTGTAGGCAGTGAATCACCGTGCT
GGCCTCTTGAGCCCAAGCCAGTCAGGGATTTTGTGCAAGAGTCAAAGAAT
CCTGTACAACCTTCCTAGACAGAAATGTGTGTGTCACTGCTGAGGGATGT
ACATGCCCATTTAATCTAATAATTATTAACTGTTAATCTCCTATCTCAAT
CAGACACAGCAGGGACTTAGCGAAGAGAAACCTATGACCATTAAGTGTGG
GTTAAAAAGTTCCCATCATTTACACACCAGAAAC

Query= MSMg01no526_j12.g1 MSMg01no526_j12.g1 CHROMAT_FILE:
MSMg01no526_j12.g1 PHD_FILE: MSMg01no526_j12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:34 2005
         (586 letters)



>mm_chr1_138771306_138772291
          Length = 986

 Score = 1085 bits (561), Expect = 0.0
 Identities = 584/601 (97%), Gaps = 15/601 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   caggatagccagggctcacttaacacccaaccccacccccaagtaaagccgatgttttac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 caggatagccagggctcacttaacacccaaccccacccccaagtaaagccgatgttttac 881

                                                                       
Query: 61  ttacacatgtacacaggcacactcacctctcagatgcagatgaatagagccctttgggaa 120
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 880 ttacacatgtacacaggcacacacacctctcagatgcagatgaatagagccctttgggaa 821

                                                                       
Query: 121 aagactacggtgactgaag---------------tcagtgctcgtgcaacgtgctgttga 165
           |||||||||||||||||||               ||||||||||||||||||||||||||
Sbjct: 820 aagactacggtgactgaagctgtggatcctgacttcagtgctcgtgcaacgtgctgttga 761

                                                                       
Query: 166 ctttgtattagtaaatacagtcccacgtctcgactgtctgaacggcgtgtatgatttatc 225
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 ctttgtattagtaaatacagtcccacgtctcgactgtctgaacggcgtgtatgatttatc 701

                                                                       
Query: 226 ctttggttagtttccagtagtcttcagttcctgatgtgtatgggttttgttccttgttgg 285
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ctttggttagtttccagtagtcttcagttcctgatgtgtatgggttttgttccttgttgg 641

                                                                       
Query: 286 agtttcagccactgatgcttcttccactttgataaagacctttttgcttggctcactttc 345
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 agtttcagccactgatgcttcttccactttgataaagacctttttgcttggctcactttc 581

                                                                       
Query: 346 cctgtctcagtgcaatccgtatccttgatagcagggcccactgaagggcactgagagcta 405
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 cctgtctcagtgcaatccgtatccttgatagcagggcccactgaagggcactgagagcta 521

                                                                       
Query: 406 gctttctgtaggcagtgaatcaccgtgctggcctcttgagcccaagccagtcagggattt 465
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gctttctgtaggcagtgaatcaccgtgctggcctcttgagcccaagccagtcagggattt 461

                                                                       
Query: 466 tgtgcaagagtcaaagaatcctgtacaaccttcctagacagaaatgtgtgtgtcactgct 525
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tgtgcaagagtcaaagaatcctgtacaaccttcctagacagaaatgtgtgtgtcactgct 401

                                                                       
Query: 526 gagggatgtacatgcccatttaatctaataattattaactgttaatctcctatctcaatc 585
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gagggatgtacatgccaatttaatctaataattattaactgttaatctcctatctcaatc 341

            
Query: 586 a 586
           |
Sbjct: 340 a 340


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space:   562176
Effective search space used:   562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)