XXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGCGGAATTCTCA
CCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAAATGTTCAACAT
CCTTAATCATCAGAGAAATGCACATCAAAACAACCCTGAGATTCCACCTC
ACACCAGTCAGAATGGCTAGGATCAAAAATTCAGGTGACACTAGATGCTG
GCGAGGATGTGGAGAAAGAGGAACACTGCTCCATTGTTGGTGGGATTGCA
AGCTTGTAAAAACCACTCTGGAAATCAGTCTGGAGGTTCCTCAGAAAATT
GGACATAGTACTACTGGAGGATCCCGTAATACCTCTCCTGTGCATATATC
CAAAAGATGTCCCAACTGGTAAGAAGGACGCATGCTCCACTATGTTCATA
GCAGCCTTATTTATAATAGCCTGAAGCTGGAAAGAACCCAGATGCCCCTC
AACAGAGGAATGGATACAGAAATTGTGGTACATTTACACAAAGGAGTACT
ACTCGGCTATTAAAAAGAATGAATTTATGAAATTCCTAAGCAAATGGATG
GACCTGGTGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAGGAACTC
ACACAATATGTACTCACTGATAAGTGGATATTAGCCCAGAAACTTAGGAT
ACCCAAGATATAAGATACAATTTGCTAAACGCATGAAATTTCACAAGAAT
GAAAGACCAAAGTTTGGACACTTTTGCCCTTTTTATAAATTGGGAACAAN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCATGAGTGCGGGGAGGGGGAAAAGGTCTTGGGAG
GTGATGGGTCCTGAGAACAATGCACTCCTCAGGATTCTCCGTGGGTGTGA
CAGTTAGGGAAGTTCTTACCAGTCGCCTTGTGTGCAGTGGAACTCCTGGA
GGTATTTCAGAGGAGCACATAAGTTGGTACTGGTGACAGGCCAAAATTGG
GATCCAGCCAAAGGGGAGGCCCGGGGTTCTGACACTGTTACTGATGCTGT
GGTGTGCTTACAGCAGCATGGCTGTCCTCTGAGAGTCCCAGCAAGCAGCT
TAGTCAGATGCAGATACTAGCATCTGAAGTCAGGGACCCCTGTGCTTGAA
TTGGGGTAAAGGTGGAAGAAGCTGAGGAGGAATGTGGCCCCATGGGAAGA
GCAGCACTCTCAACTAATCCAGACCCCTGAGAACTCTCAGACACTGATCC
ACCATCCAGGTAGCACACACCAGCTGATACATATACAGCAGAAGACTGCC
TCCTATGGCCTCAATGAGAGAAGATGCACCTAAGCCTTGAGAGACTTGAG
CCCCCCCCCGGGGGGGATGGGGTGGAGACATTCTCTTGGAGACTTGGGGG
GGGAGGTATGGTATGGGGAACNGTCTTGGGGCAGTCTGGNAGGGGGAGGG
AGCCTAAACTGTTAAAAATGATTATAGAAGGAAATT

Query= MSMg01no526_n20.g1 MSMg01no526_n20.g1 CHROMAT_FILE:
MSMg01no526_n20.g1 PHD_FILE: MSMg01no526_n20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:55 2005
         (604 letters)



>mm_chr1_147356355_147357358
          Length = 1004

 Score =  988 bits (511), Expect = 0.0
 Identities = 580/611 (94%), Gaps = 17/611 (2%)
 Strand = Plus / Plus

                                                                       
Query: 10  ggggagggggaaaaggtcttgggaggtgatgggtcctgagaacaatgcactcctcaggat 69
           ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||| |
Sbjct: 210 ggggagggggaaaaggtcttgagaggcgatgggtcctgagaacaatgcgctcctcagggt 269

                                                                       
Query: 70  tctccgtgggtgtgacagttagggaagttcttaccagtcg-ccttgtgtgcagtggaact 128
           ||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 270 tctccgtaggtgtgacagttagggaagttcttaccagtcgacct-gtgtgcagtggaact 328

                                                                       
Query: 129 cctggaggtatttcagaggagcacataagttggtactggtgacaggccaaaattgggatc 188
           |||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||
Sbjct: 329 cctggaggaatttcagaggagcacataagttggcgctggtgacaggccaaaattgggatc 388

                                                                       
Query: 189 cagccaaaggggaggcccggggttctgacactgttactgatgctgtggtgtgcttacagc 248
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 389 cagcccaaggggaggcccggggttctgacactgttactgatgctgtggtgtgcttgcagc 448

                                                                       
Query: 249 agcatggctgtcctctgagagtcccagcaagcagcttagtcagatgcagatactagcatc 308
           ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 449 agcatggctgtcctctgagagtcccagcaagcaccttagtcagatgcagatactagcacc 508

                                                                       
Query: 309 -------tg-----aagtcagggacccctgtgcttgaattggggtaaaggtggaagaagc 356
                  ||     || || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 caagcaatggacggaaatccgggacccctgtgcttgaattggggtaaaggtggaagaagc 568

                                                                       
Query: 357 tgaggaggaatgtggccccatgggaagagcagcactctcaactaatccagacccctgaga 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tgaggaggaatgtggccccatgggaagagcagcactctcaactaatccagacccctgaga 628

                                                                       
Query: 417 actctcagacactgatccaccatccaggtagcacacaccagctgatacatatacagcaga 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 actctcagacactgatccaccatccaggtagcacacaccagctgatacatatacagcaga 688

                                                                       
Query: 477 agactgcctcctatggcctcaatgagagaagatgcacctaagccttgagagacttgagcc 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 agactgcctcctatggcctcaatgagagaagatgcacctaagccttgagagacttgagcc 748

                                                                       
Query: 537 ccccccc---gggggggatggggtggagacattctcttggagacttggggggggaggtat 593
           |||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 ccccccccgggggggggatggggtggagacattctcttggagacttggggggggaggtat 808

                      
Query: 594 ggtatggggaa 604
           |||||||||||
Sbjct: 809 ggtatggggaa 819


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space:   590436
Effective search space used:   590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)