NNNCCGTTATTTTGCGGGCGCTATACGACTCCTATATGGAGAGGATCCGC
GGAATTCATAGATTTCCTCGTGCTTATTTAAAACACCTTGTTTTCTTCAT
GTCTTCAATCCTGTCTGACTCTTAGGTTCTTTCTGTCTCCTCTTTCTTGG
AATTTCCTGAGCCCTGAGGTGAGGTATTAATGGAGAGATCTCATTTATTA
CTGAGCATTGTAAGGTGTCTCATTCTCTGTATAACATCTGTTTGTATGCC
TCTTTCCTATTGTCAATTGTAGTAAATGGAAACTTTCCTGATGATGGCTC
AGCAAGGCACTGATCTATGACTATAGCAAAATGTTATAAAGAGAATTTTT
GTCACAACCTTTGTTTATTTTATTTTGTTGTTGCTATTGTTGTCTTATTC
AATAGTATTTGGTCCCTGGACTTTGATTATTGGTCACTCAAGAAGTGTTA
GATATGGATTCTATCTCCAGGAGTGGGCCATAATTTTATCAAATACTGGC
TAGTTACACTCTCAAGTTTTATTCTACCATTGTCCTAGGCAATGCACCCT
ATGTGTATTGTAGATAAAAGGAGTGTGGCTGGATTGGCATTGAATTTTCT
CATTTGATAGCATCTAGAGTATATTCCAAAGACACTAGTGTGCAAGGGTA
AAGGTTTTATGTAGGCAGCAGATTAAACTTTCCAATTTCAATGTGTTGTG
TGCTTGTTGTCTCCAGCAATGACACCTTCCCTATCACACTTGNAGAGCAG
CATATTGTCTTTAGCACAGNATGGGTT

NNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCATAGAGACAAATAGTCTTGGGGGC
ATCCGGTTAACCCACTCAATCTGGACTGAGTGGAGCTTCCCTGGAGATGT
TCCAGGAAGCAAAGAATCAGAAATAAGAAAGGCTTTAATTTTTATGCTCA
AACCCAGAAAAGGCCAGCATTGACTTCTTGCCATATTTTGAGGTATAATT
AGCCTGAAAAAAGTCACATTCTTAACATTATGTGCATATCACAAGTTTAA
TAAGAGCACCTTACACTTAGGGATACTGTTGTCTCATTCTCACCTAAAAT
GCTATACCTTGCTCTTTGCCTTCTTAATGTTCAGGCGTGATTGTAAAGGG
AAGAAACTCTATAGATGCTGTAGTTTTTAAAACTGAAGGACAAGAATTCA
CTGTGTGTAATCAGAACGTCCTTTTGAAAGCAGATACATTCTCTTTGCCA
AATGATGTTACCTATGGCAATAAACCTGAAATTTCTTGGCTCTAAGCCAG
TAAGACACAGGAATACAACGACAACATTCTATAGGAGGAAATGTATCCCC
TCTCTGGAATTCTTGCTTGGGATTATACAGGCCTCTCTTCCTCCATGTGA
TTGATATTTCGGTATCAAATGAAAGGGACCATATTTTCTATCATCTAACG
CCTCAGATGGGAGCAATATTCCCTTATGCCTTAGCTATCAGATTTTTTTG
GACAACTTATTTTAGCTTGATCAGCTN

Query= MSMg01no527_b24.g1 MSMg01no527_b24.g1 CHROMAT_FILE:
MSMg01no527_b24.g1 PHD_FILE: MSMg01no527_b24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:16 2005
         (572 letters)



>mm_chr1_149092807_149093778
          Length = 972

 Score = 1083 bits (560), Expect = 0.0
 Identities = 569/572 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   catagagacaaatagtcttgggggcatccggttaacccactcaatctggactgagtggag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 catagagacaaatagtcttgggggcatccggttaacccactcaatctggactgagtggag 713

                                                                       
Query: 61  cttccctggagatgttccaggaagcaaagaatcagaaataagaaaggctttaatttttat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 cttccctggagatgttccaggaagcaaagaatcagaaataagaaaggctttaatttttat 653

                                                                       
Query: 121 gctcaaacccagaaaaggccagcattgacttcttgccatattttgaggtataattagcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gctcaaacccagaaaaggccagcattgacttcttgccatattttgaggtataattagcct 593

                                                                       
Query: 181 gaaaaaagtcacattcttaacattatgtgcatatcacaagtttaataagagcaccttaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 592 gaaaaaagtcacattcttaacattatgtgcatatcacaagtttaataagagcatcttaca 533

                                                                       
Query: 241 cttagggatactgttgtctcattctcacctaaaatgctataccttgctctttgccttctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 cttagggatactgttgtctcattctcacctaaaatgctataccttgctctttgccttctt 473

                                                                       
Query: 301 aatgttcaggcgtgattgtaaagggaagaaactctatagatgctgtagtttttaaaactg 360
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 472 aatgttcaggcgtgattgtaaaggggagaaactctatagatgctgtagtttttaaaactg 413

                                                                       
Query: 361 aaggacaagaattcactgtgtgtaatcagaacgtccttttgaaagcagatacattctctt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aaggacaagaattcactgtgtgtaatcagaacgtccttttgaaagcagatacattctctt 353

                                                                       
Query: 421 tgccaaatgatgttacctatggcaataaacctgaaatttcttggctctaagccagtaaga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tgccaaatgatgttacctatggcaataaacctgaaatttcttggctctaagccagtaaga 293

                                                                       
Query: 481 cacaggaatacaacgacaacattctataggaggaaatgtatcccctctctggaattcttg 540
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 292 cacaggaatacaacgacaacattctataggaggaaatatatcccctctctggaattcttg 233

                                           
Query: 541 cttgggattatacaggcctctcttcctccatg 572
           ||||||||||||||||||||||||||||||||
Sbjct: 232 cttgggattatacaggcctctcttcctccatg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)