GGGGNAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCATTTTTTCAAACATCTCAGAAATAATACTATGCAAAG
TCTTCAAGAAATGTTTTTTAGTATAAAAGGCAAAAAGTCCATGGGACTTT
TAAAAATATTATATTGGATATAAGCATATGCCCAAAGTTCCATGCTCAGG
AGTCTGAAGCAGGATGATAATGAGTTAGATAGAGCATTTGCTGTAGAGAC
AATTCTGTCTTAAAAAAACAGAAACAAGCTCATAGGTAGACTTTCGGAGA
GAATATGACAGTTAGTAGTTACCTATTTGAGGATATCTCTAGTGTTTTTG
CAGTTAAATTTCATTATTTTTAACATATTAAAAATATATATTCAAAAAAT
ATTGACACATTTTTAATATATCCACAACTAAGCAAGTTCATAGAAAATGT
AGTAGTCTCTTAACTTAGACATTTTTCAATTAGCTAAATAACATTAAAGT
CCTTTCTCTGCTTAGACGCTCAGATGGACTGTAAATATTTGTTGAAAGAG
TTCTCCTAATATAAGTGAGACTCTAGATTGCTGTTCTTTTACACATCCTG
GAAACACAACTTTCCAGAAATACAGAGGACAAATGTGACTCGAGGATTCC
ATGTATGATATAAAAATAATTACAGACTAACTTGAGAATTCAGAACTGTA
AAGGTCAAGTGCATGGCTCTTTCTGTCTTTTAAAA

NAAAAAACCGATTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAAACTT
TTATCATGAATGGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAAC
GAGATGATCATGTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTAC
ATTGATGGATTTTCGTATATTAAACCATCCCTGCATCCCTGGAATAAAAC
CTACTTGGTCAGGATGGATGATTTCTTTAATGTGTTCTTGGATTCGGTTA
GCGAGAATTTTATTAAGGATTTTTGCATCGATATTCATAAGAGAAATTGG
TCTGAAGTTCTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAG
TAATAGTGGCTTCATAAAATGAGTTGGGTAGAGTACCTTCTACTTCTATC
TTGTGAAATAGTTTGTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTG
ATAGAACTCTGCACTAAACCCATCTGGTCCTGGGCTTTTTTTGGCTGGGA
GACTATTAATAACTGCTTCTATTTCTTTAGGGGATATGGGACTGTTTAGA
AGGTCAACTTGATCCTGATTCAACTTTGGCACCTGGTATCTGTCCAGAAA
TTTGTCCATTTCGTCCAGGTTTTCCAGTTTTGTTGAGTATAAGCTTTTGT
AGAAGGATCTGATGGTGTTTTGGATTTCTTCAGGATCTG

Query= MSMg01no527_l01.b1 MSMg01no527_l01.b1 CHROMAT_FILE:
MSMg01no527_l01.b1 PHD_FILE: MSMg01no527_l01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:01 2005
         (682 letters)



>mm_chr1_66768175_66769256
          Length = 1082

 Score = 1029 bits (532), Expect = 0.0
 Identities = 532/532 (100%)
 Strand = Plus / Minus

                                                                        
Query: 151  ctgaagcaggatgataatgagttagatagagcatttgctgtagagacaattctgtcttaa 210
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 ctgaagcaggatgataatgagttagatagagcatttgctgtagagacaattctgtcttaa 1023

                                                                        
Query: 211  aaaaacagaaacaagctcataggtagactttcggagagaatatgacagttagtagttacc 270
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 aaaaacagaaacaagctcataggtagactttcggagagaatatgacagttagtagttacc 963

                                                                        
Query: 271  tatttgaggatatctctagtgtttttgcagttaaatttcattatttttaacatattaaaa 330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962  tatttgaggatatctctagtgtttttgcagttaaatttcattatttttaacatattaaaa 903

                                                                        
Query: 331  atatatattcaaaaaatattgacacatttttaatatatccacaactaagcaagttcatag 390
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902  atatatattcaaaaaatattgacacatttttaatatatccacaactaagcaagttcatag 843

                                                                        
Query: 391  aaaatgtagtagtctcttaacttagacatttttcaattagctaaataacattaaagtcct 450
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842  aaaatgtagtagtctcttaacttagacatttttcaattagctaaataacattaaagtcct 783

                                                                        
Query: 451  ttctctgcttagacgctcagatggactgtaaatatttgttgaaagagttctcctaatata 510
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782  ttctctgcttagacgctcagatggactgtaaatatttgttgaaagagttctcctaatata 723

                                                                        
Query: 511  agtgagactctagattgctgttcttttacacatcctggaaacacaactttccagaaatac 570
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722  agtgagactctagattgctgttcttttacacatcctggaaacacaactttccagaaatac 663

                                                                        
Query: 571  agaggacaaatgtgactcgaggattccatgtatgatataaaaataattacagactaactt 630
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662  agaggacaaatgtgactcgaggattccatgtatgatataaaaataattacagactaactt 603

                                                                
Query: 631  gagaattcagaactgtaaaggtcaagtgcatggctctttctgtcttttaaaa 682
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602  gagaattcagaactgtaaaggtcaagtgcatggctctttctgtcttttaaaa 551


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space:   720384
Effective search space used:   720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)