NNNTTTTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCCTTTACGCTCAAAGGCTGTTTCTCTCATTGATGTCC
AAAATGACCATCCTCTGTCACATGTGCAACCAGAGCCATGGGTCCTTCCA
TGTATACTATTTGGTTTGTGGTCCAGACCCCAGGAGCTTTGGAGGGGGGA
GTCTGGCCTGTTGACACTGTTGCCCTCCCCATGGGGCTGCAAACCCCTTC
AACTCCTTCAGTCCCTTCTCCAAATCCTTCATCGGGGACCCTGTGCTCAG
CCCAATGGTTGGCTCCAGGAATGAGCCTTTGTATTTCTTTGGCTCTCACA
GTACCTTTCAGGAAACAGCCATATCAGGCTCCTGTAAGCAAGCACTTCCC
GGCATCAGCAATAGAGTCCTGGTTTGGTGACTGTATATGGGATGGATCCA
CAGGTGGGACAGTCTCTGCATGGCTTTTCTTTCAGTCTCTGCTCCACACT
TTGTCTCCATGTTTCCTCCTGCGAATATTTGTTCCCCCTTCTAAGAAGCT
CTGAAGTATCCAGTCTTTGGTCTTCAGAGTTGTTTTAGCTATCCTGTTTT
GTGCAATGTTTGTTTTTGCTTTTTTGTTTTTCCATATGAAGCTGAGAACT
GTCCTTTCATGCAGGATCTGTGGTATTTTATTTACCAATGCATGATTTTG
TATTTTAATGGGGATTATATTTAATTTGCAGATTGCTTTTGGC

NNTTCTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACCAGCAGCATGGAC
AGAGGAGGGAAGGCCATAGTTTGGGATATGTTGCAGCATTGGGGAAGATG
CTGATTAATAGGTGTTTTATTCTGGCAGGTATGGCTAGTACCTTTCAAAT
TTTAGTGCCAATAAGCGAAACTGATGACAAGTGGTTTCTTTTAAACTTTA
GCATTTTACATTTTTTGACTATTTCTATATCTAATGTGAATCCATGAACT
ATGTTACATTTTTATAGATTAATTAGCTTTTTTCACCTTTAAAATGATAT
CTAAATAGAAAGTTTCAATCCTTTATTATTTTCAGCTGGTGAGACATATA
GACAATTTCTGTATCTGGGCAGGTTAAGGAGCCTGAAGATTATGCCACAT
GGAGATATAAATAGAAGCATGTAACCACATTGTTTTCTCTAAAGATCAAC
CTATTAAGCCTTAACTTGTTCTACTTGCTTAACAAAATACTCTTTATATT
TCTTAACTCCAAACTGAGATATTCAGGAATTTGTAAGTACCATAATTTAC
ATTATAAAGCAGTTGCAAATTTGCAGGAGAAATAAAATTCTTAGAGGAGG
AAAGTTTCTCATACAATCCTTTGATAAATTAGGGAAATTGTGTGCAATGT
AAATCTGGAAACACAGATGACAGTCATGAATATTATN

Query= MSMg01no527_p10.g1 MSMg01no527_p10.g1 CHROMAT_FILE:
MSMg01no527_p10.g1 PHD_FILE: MSMg01no527_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:25 2005
         (652 letters)



>mm_chr1_49832152_49833208
          Length = 1057

 Score = 1226 bits (634), Expect = 0.0
 Identities = 649/656 (98%), Gaps = 5/656 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   accagcagcatggacagaggagggaaggccatagtttgggatatgttgcagcattgggga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 accagcagcatggacagaggagggaaggccatagtttgggatatgttgcagcattgggga 797

                                                                       
Query: 61  agatgctgattaataggtgttttattctggcaggtatggctagtacctttcaaattttag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 agatgctgattaataggtgttttattctggcaggtatggctagtacctttcaaattttag 737

                                                                       
Query: 121 tgccaataagcgaaactgatgacaagtggtttcttttaaactttagcattttacattttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tgccaataagcgaaactgatgacaagtggtttcttttaaactttagcattttacattttt 677

                                                                       
Query: 181 tgactatttctatatctaatgtgaatccatgaactatg-ttacatttttatagattaatt 239
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 676 tgactatttctatatctaatgtgaatccatgaactatgattacatttttatagattaatt 617

                                                                       
Query: 240 agcttttttcacctttaaaatgatatctaaatagaaagtttcaatcctttattattttca 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 agcttttttcacctttaaaatgatatctaaatagaaagtttcaatcctttattattttca 557

                                                                       
Query: 300 gctggtgagacatatagac----aatttctgtatctgggcaggttaaggagcctgaagat 355
           |||||||||||||||||||    |||||||||||||||||||||||||||||||||||||
Sbjct: 556 gctggtgagacatatagacaattaatttctgtatctgggcaggttaaggagcctgaagat 497

                                                                       
Query: 356 tatgccacatggagatataaatagaagcatgtaaccacattgttttctctaaagatcaac 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tatgccacatggagatataaatagaagcatgtaaccacattgttttctctaaagatcaac 437

                                                                       
Query: 416 ctattaagccttaacttgttctacttgcttaacaaaatactctttatatttcttaactcc 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctattaagccttaacttgttctacttgcttaacaaaatactctttatatttcttaactcc 377

                                                                       
Query: 476 aaactgagatattcaggaatttgtaagtaccataatttacattataaagcagttgcaaat 535
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 376 aaactgagatattcaggaatttgtaagtaccataatttacgttataaagcagttgcaaat 317

                                                                       
Query: 536 ttgcaggagaaataaaattcttagaggaggaaagtttctcatacaatcctttgataaatt 595
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 316 ttgcaggagaaataaaattcttagaggaggaaagtttctcatacaatcatttgataaatt 257

                                                                   
Query: 596 agggaaattgtgtgcaatgtaaatctggaaacacagatgacagtcatgaatattat 651
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agggaaattgtgtgcaatgtaaatctggaaacacagatgacagtcatgaatattat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1057
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1047
Effective search space:   672174
Effective search space used:   672174
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)