AACAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACTTGAAAAAATG
TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT
TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC
AGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG
GGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCA
GAAAACTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGC
ATATATCCAGAAGATGCCCCAACAGGTAAGAAGGACACATGCTCCACTAT
GTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACTAGATG
CCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGG
AGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAA
TGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAG
AAACTCACACAATATGTATTCACTGATAAGTGGATATTAGCCCCAAACCT
AGGATACCCAAGATATAAGATATAATTTGCTAAACACATGAAACTCAAGA
AGAATGAAGACTGAAGTGTGGACACTATGCCCCTCCTTAGATTTGGGAAC
AAAAACCCA

NCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTTTTCAAAATTGTTTAATGACGA
CTGTTAGCATGTGTTTCTTACTAAGCATGGTGAGCTTCCAGTGTTAGTGT
TTGCCCTCTGATTCCTGTCACTTAGCTTCACTCTTGAGCTATAGGCCTTG
ATAAAACAAGGGCCAGAGCTGTCCAGCGTTTTGTAAAACAGTACTCCTCC
AACTCAGGACCTTGTCTCCTCCACTTGGCAGCTTCACGATTCTGCTTTCT
CTTAGTGAGCCCATTTGCTACACTTGCAAGAACGTCTCTGTATCCAATTC
ATTAGGGTACTATTCTGGATACAACCTATATGTTAAATCACAGATGAACC
AGATTTGCCAGGCAGCCCCACCTGAACCTAGTGAGAAGTTTAAGGGGGAA
TTTGGTATTAAGGTGCAGTCATTTACTTATTAGAATGCAGTGTGATGGTT
TGTATATGTTCAGCCCCAGACGTGGCACTATTAGGAGATGTGGCCTTGTT
GAAGTAGGTGTGTCACTGTGGACATGGGCATGGGCTTTAATACCCTAGTT
CTAGCTACCTGGAAGCCAGTATTCTGCTCTCAGCCTTTAGATGAAGATGT
AGAACTCTCAGTTCCTCGTGCACCATGCCTGCCTAGATGCTGCCATGCTC
TCACATGGAAGATAATGGACTGAACCTCTGAACTTGTAAGCCAGGTCCAA
TTATGTTGTCCTTA

Query= MSMg01no528_m18.g1 MSMg01no528_m18.g1 CHROMAT_FILE:
MSMg01no528_m18.g1 PHD_FILE: MSMg01no528_m18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:30 2005
         (628 letters)



>mm_chr1_30629442_30630469
          Length = 1028

 Score = 1199 bits (620), Expect = 0.0
 Identities = 626/628 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttttcaaaattgtttaatgacgactgttagcatgtgtttcttactaagcatggtgagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttttcaaaattgtttaatgacgactgttagcatgtgtttcttactaagcatggtgagct 260

                                                                       
Query: 61  tccagtgttagtgtttgccctctgattcctgtcacttagcttcactcttgagctataggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccagtgttagtgtttgccctctgattcctgtcacttagcttcactcttgagctataggc 320

                                                                       
Query: 121 cttgataaaacaagggccagagctgtccagcgttttgtaaaacagtactcctccaactca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgataaaacaagggccagagctgtccagcgttttgtaaaacagtactcctccaactca 380

                                                                       
Query: 181 ggaccttgtctcctccacttggcagcttcacgattctgctttctcttagtgagcccattt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaccttgtctcctccacttggcagcttcacgattctgctttctcttagtgagcccattt 440

                                                                       
Query: 241 gctacacttgcaagaacgtctctgtatccaattcattagggtactattctggatacaacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctacacttgcaagaacgtctctgtatccaattcattagggtactattctggatacaacc 500

                                                                       
Query: 301 tatatgttaaatcacagatgaaccagatttgccaggcagccccacctgaacctagtgaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatatgttaaatcacagatgaaccagatttgccaggcagccccacctgaacctagtgaga 560

                                                                       
Query: 361 agtttaagggggaatttggtattaaggtgcagtcatttacttattagaatgcagtgtgat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtttaagggggaatttggtattaaggtgcagtcatttacttattagaatgcagtgtgat 620

                                                                       
Query: 421 ggtttgtatatgttcagccccagacgtggcactattaggagatgtggccttgttgaagta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggtttgtatatgttcagccccagacgtggcactattaggagatgtggccttgttgaagta 680

                                                                       
Query: 481 ggtgtgtcactgtggacatgggcatgggctttaataccctagttctagctacctggaagc 540
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 681 ggtgtgtcactgtggacatgggcatgggctttaataccctagtcctagctacctggaagc 740

                                                                       
Query: 541 cagtattctgctctcagcctttagatgaagatgtagaactctcagttcctcgtgcaccat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 741 cagtattctgctctcagcctttagatgaagatgtagaactctcagttcctcgtgcgccat 800

                                       
Query: 601 gcctgcctagatgctgccatgctctcac 628
           ||||||||||||||||||||||||||||
Sbjct: 801 gcctgcctagatgctgccatgctctcac 828


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space:   629124
Effective search space used:   629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)