Query= MSMg01no529_p07.b1 MSMg01no529_p07.b1 CHROMAT_FILE:
MSMg01no529_p07.b1 PHD_FILE: MSMg01no529_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:06 2005
(660 letters)
>mm_chr1_82637649_82638707
Length = 1059
Score = 1216 bits (629), Expect = 0.0
Identities = 650/657 (98%), Gaps = 1/657 (0%)
Strand = Plus / Minus
Query: 4 gaattctgcaatgtacctttgaatttttgtttcaacagggctgctgccaatttcgccacc 63
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 gaattctgcaatggagctttgaatttttgtttcaacagggctgctgccaatttcgccacc 800
Query: 64 agggggcggtcttgttccagtgcagcggcacagcgtcgcgggtttcaatgtttacatcga 123
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 799 agggggcggtcttgttccagtgcagcggcacagcgttgcgggtttcaatgtttacatcga 740
Query: 124 agcgagagaatcaagttgttttaatttcttctctcatgtttagcaacattataaatatag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 agcgagagaatcaagttgttttaatttcttctctcatgtttagcaacattataaatatag 680
Query: 184 agtatgctagggaggctttcatagaaatgttctttttctgccaacttgctacttattcag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 agtatgctagggaggctttcatagaaatgttctttttctgccaacttgctacttattcag 620
Query: 244 ccaagagagttacagtctggctgccagtatttacttctaggtagccggaggagctttcaa 303
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 619 ccaagagagttacagtctggctgccagtatttac-acaaggtagccggaggagctttcaa 561
Query: 304 cattgtttaaggttaatgtttatatacaattactttaaaggtggatttaggggactggat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cattgtttaaggttaatgtttatatacaattactttaaaggtggatttaggggactggat 501
Query: 364 gatgatctccactacagaagggcgaagtgtgaccgactcaggcatctgtgaagaggcggc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gatgatctccactacagaagggcgaagtgtgaccgactcaggcatctgtgaagaggcggc 441
Query: 424 gagaagttctcttcttaccttctcccctttggtccccgcgcagaggcattgtcctttgcc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gagaagttctcttcttaccttctcccctttggtccccgcgcagaggcattgtcctttgcc 381
Query: 484 tttgcagacacagccctgggaagagcagaagaggacagttggtggatagcgaactgtttt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttgcagacacagccctgggaagagcagaagaggacagttggtggatagcgaactgtttt 321
Query: 544 ctgtgctttgaaccttggacaccaaaatcatgatccgcatgacattatggcaatacttca 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctgtgctttgaaccttggacaccaaaatcatgatccgcatgacattatggcaatacttca 261
Query: 604 atgaaaatgaatagagaaaaacatcacagaagaaatgtcaaatgacataaaagtgtc 660
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 acgaaaatgaatagagaaaaacatcacagaagaaatgtcaaatgacataaaagtgtc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1059
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1049
Effective search space: 681850
Effective search space used: 681850
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_p07.g1 MSMg01no529_p07.g1 CHROMAT_FILE:
MSMg01no529_p07.g1 PHD_FILE: MSMg01no529_p07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:06 2005
(596 letters)
>mm_chr1_82481603_82482598
Length = 996
Score = 1152 bits (596), Expect = 0.0
Identities = 596/596 (100%)
Strand = Plus / Plus
Query: 1 cttaattgaatgactggttcttatggaacatggggacactctctagagatgtgggtctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttaattgaatgactggttcttatggaacatggggacactctctagagatgtgggtctgg 260
Query: 61 tcatttgtaccagctgcaatttgagatgcttcgatcacgacatagacggcttctgaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcatttgtaccagctgcaatttgagatgcttcgatcacgacatagacggcttctgaaaca 320
Query: 121 tgcgtggagaggaagtcatgatatgtgtacgtatgccagatcctatctggtacctttgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcgtggagaggaagtcatgatatgtgtacgtatgccagatcctatctggtacctttgac 380
Query: 181 ctgtgtggaaaataagaactctctgaagcttccgtgtctcactgcctagagtctaagagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtgtggaaaataagaactctctgaagcttccgtgtctcactgcctagagtctaagagt 440
Query: 241 cgcttctgagttctaatttgtgaagcaatttatcattaacaagatactcactctcaacgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgcttctgagttctaatttgtgaagcaatttatcattaacaagatactcactctcaacgc 500
Query: 301 tagaattcctggaactctgaatttgctagctgggaacattttccaagccatacctttagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagaattcctggaactctgaatttgctagctgggaacattttccaagccatacctttagg 560
Query: 361 tcctcttgctccatcatctcctgggaatccagggggtcctggagaacctggatcaccctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcctcttgctccatcatctcctgggaatccagggggtcctggagaacctggatcaccctg 620
Query: 421 acaattaatggaacaaaaataagaccctcgttgggttttccatgctgtggcacaaagaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acaattaatggaacaaaaataagaccctcgttgggttttccatgctgtggcacaaagaca 680
Query: 481 ttacagttttctgcagccaagttagtgtttgtaattggcaatggtgaaggaaactgttag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttacagttttctgcagccaagttagtgtttgtaattggcaatggtgaaggaaactgttag 740
Query: 541 tgtcttgtaagcataatactaactatgtctatgttttatgagcgggtaaaactcct 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtcttgtaagcataatactaactatgtctatgttttatgagcgggtaaaactcct 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
