CCGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTCAACTGTACGCATACCGAATGGCAGAGAAGCACCTGAAA
AAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCT
GAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTG
ACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGT
TGGTGGGATTGTAGGCTTGTACAACCACTCTGGAAATCCGTCTGGCGGTT
CCTCAGAAAATTGGACATAGTACTACCTGAGGATCCAGCAATACCTCTCC
TGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCC
ACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACC
CAGATGCCCCTCAACAGAAGAATGGATACAGAAAATGTGGTACATCTACA
CAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTA
GCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTC
ACAAAGGAACTCATACAATATGTACTCACTGATTAGGGGATAGTAGCCCA
AAACCTTGGGATACCCAGTATATAAGAATACTTTTTCCTAAACACCATGA
AACTCCATGAAAATATGGAAGACTGTAAGTGGGGGACACCTATGGCCCCC
TCN

NCCCCCACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACATTTGTGGGATATAA
CTAATAGCAACCACATTATTAAAACAATTACCTGAATCTCTCTATACAGA
ACTGTGCATCCACATACTGACCAAGATACATAAGTTTTTCCTGAACCCCA
GTTTTTATCCACGTTATTTCTCCATGAAACAGTGATAACATTTTTCAATA
AAAAAACCTTCCTGTAATATATCAGAAGCTTAGAAATGGTTTATTACTGC
AGAAAAAGACCACTTAAACCCAGTAAAAGACCATCTCTACTTAATCTAGT
TCTAATATTATATATGGAATATCTTTCTTCCTTTGATCTTAGCGATGACT
GAAGACTTGCTCTTGTTTAAGAGTAGCTCTGTCATTCATAAGCTGTGATC
TCTGCATATATTCTCTAGTGGTTTAGCCTTGGGAAGTGGGTAATATTGGG
CACCCAACAGGTTTGTGAGGGGAGAATCTGATGTTAATTAATATCAGATC
ATACTAATCTATATATATTTTGAGCAGATAGACCAGACAGCAGACCAGGC
CAAGGTGGTTCCTCGTGGAAGAGGTTTATTGTGCAGGGATAGGGGGCTGC
GAGGCGGGTAGAATGGCTGAGAAGAGGAAAAAGAGAGAAGGAGAGGTAGA
GAAGAAGAGAAGAAGAGAGAGCTTGGAGGGGTGATCCCC

Query= MSMg01no532_e10.g1 MSMg01no532_e10.g1 CHROMAT_FILE:
MSMg01no532_e10.g1 PHD_FILE: MSMg01no532_e10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:09 2005
         (512 letters)



>mm_chr1_11313672_11314586
          Length = 915

 Score =  861 bits (445), Expect = 0.0
 Identities = 497/515 (96%), Gaps = 3/515 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acatttgtgggatataactaatagcaaccacattattaaaacaattacctgaatctctct 60
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 acatttgtgggatataactaatagcaaccacattattaaaacagttacctgaatctctct 260

                                                                       
Query: 61  atacagaactgtgcatccacatactgaccaagatacataagtttttcctgaaccccagtt 120
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atacagaactgtgcatccacgtactgaccaagatacataagtttttcctgaaccccagtt 320

                                                                       
Query: 121 tttatccacgttatttctccatgaaacagtgataacatttttcaat-aaaaaaaccttcc 179
           ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 321 tttatccacgtcatttctccatgaaacagtgataacatttttcaataaaaaaaatcttcc 380

                                                                       
Query: 180 tgtaatatatcagaagcttagaaatggtttattactgcagaaaaagaccacttaaaccca 239
           |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 381 tgtaatatatcagaagcttagaaatggtttattactacagaaaaagaccatttaaaccca 440

                                                                       
Query: 240 gtaaaagaccatctctacttaatctagttctaatattatatatggaatatctttcttcct 299
           |||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||
Sbjct: 441 gtaaaagaccatctctacttaatctacttctaatattacatatagaatatctttcttcct 500

                                                                       
Query: 300 ttgatcttagcgatgactgaagacttgctcttgtttaagagtagctctgtcattcataag 359
           ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 501 ttgatcttagcgatgactgaagacttgctcttggttaagagtagctctatcattcataag 560

                                                                       
Query: 360 ctgtgatctctgcatatattctctagtggtttagccttgggaagtgggtaatattgggca 419
           ||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 561 ctgtgatctgtgcatatattctctagtggtttagtcttgggaagtgggtaatactgggca 620

                                                                       
Query: 420 cccaacaggtttgtgaggggagaatctgat--gttaattaatatcagatcatactaatct 477
           ||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||
Sbjct: 621 cccaacaggcttgtgaggggagaatctgatatgttaattaatatcagatcatactaatct 680

                                              
Query: 478 atatatattttgagcagatagaccagacagcagac 512
           |||||||||||||||||||||||||||||||||||
Sbjct: 681 atatatattttgagcagatagaccagacagcagac 715


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 915
Length adjustment: 10
Effective length of query: 502
Effective length of database: 905
Effective search space:   454310
Effective search space used:   454310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)