Query= MSMg01no532_l02.b1 MSMg01no532_l02.b1 CHROMAT_FILE:
MSMg01no532_l02.b1 PHD_FILE: MSMg01no532_l02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:41 2005
(661 letters)
>mm_chr1_156464229_156465289
Length = 1061
Score = 1243 bits (643), Expect = 0.0
Identities = 653/657 (99%), Gaps = 3/657 (0%)
Strand = Plus / Plus
Query: 5 gaattcaccagtcatctcagccatatcagttccctaagatactcatttggtgacaagtca 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcaccagtcagctcagccatatcagttccctaagatactcatttggtgacaagtca 266
Query: 65 tagaagtgactattagacctcaaaacacacacacacacacacacacacacacatacacac 124
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 267 tagaagtgactattagacctcaaaacacacacacacacacacacacacaca--tacacac 324
Query: 125 aaaaccttcagtgtcattagaacagaaaagaaaccgtgggtatcaagcagctaatagcta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaaccttcagtgtcattagaacagaaaagaaaccgtgggtatcaagcagctaatagcta 384
Query: 185 tattcatttacaagttaattatttatattggtataattacataaatagatcatattgatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tattcatttacaagttaattatttatattggtataattacataaatagatcatattgatt 444
Query: 245 taccataggaacataatttgtgttagcaaaatatttatttttagttttcaaagatcaaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taccataggaacataatttgtgttagcaaaatatttatttttagttttcaaagatcaaag 504
Query: 305 aattgttaaaaaattggaagaaactgggatgaccacaggttagattggttttttgttttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aattgttaaaaaattggaagaaactgggatgaccacaggttagattggttttttgttttg 564
Query: 365 ttttgtttgtttgtttgtttttctttttttctttttttttttggtttttatcatgtcaaa 424
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 565 ttttgtttgtttgtttgtttttctttttttctttttttttt-ggtttttatcatgtcaaa 623
Query: 425 acatgatttcaatgtcaaaagaatttctttaattcaacttcatgttgaacaaatgtaatt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 acatgatttcaatgtcaaaagaatttctttaattcaacttcatgttgaacaaatgtaatt 683
Query: 485 ttgtgaacatctatgtagccactcttttctcagtctgtcaggcttgtaaagatctcatca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttgtgaacatctatgtagccactcttttctcagtctgtcaggcttgtaaagatctcatca 743
Query: 545 caggctcaacagagctccccagggacactgctgcacgggaacccaaatctgcctcagcag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 caggctcaacagagctccccagggacactgctgcacgggaacccaaatctgcctcagcag 803
Query: 605 ctattgacaggaaagagtcctaaagcactggagaccggaagcagctgcagggtcact 661
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ctattgacaggaaagagtcctaaagcactggagaccggaagcagctgcagggtcact 860
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_l02.g1 MSMg01no532_l02.g1 CHROMAT_FILE:
MSMg01no532_l02.g1 PHD_FILE: MSMg01no532_l02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:41 2005
(594 letters)
>mm_chr1_156589315_156590308
Length = 994
Score = 801 bits (414), Expect = 0.0
Identities = 414/414 (100%)
Strand = Plus / Minus
Query: 181 acaagtgtgaagtggaatccaattattacattaattgaactttctctgattactgataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 acaagtgtgaagtggaatccaattattacattaattgaactttctctgattactgataaa 935
Query: 241 attaggcaattaatagaagttaattggccagatggatttcctctcatatgaatcttggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 attaggcaattaatagaagttaattggccagatggatttcctctcatatgaatcttggat 875
Query: 301 tcatattctttgcctatattatatgtttctaggtgatttgtgttttttatgatttgtaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 tcatattctttgcctatattatatgtttctaggtgatttgtgttttttatgatttgtaag 815
Query: 361 gattatgtgtattctagctatgactttcaggctgtaactcttctcccccatgaacttgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 gattatgtgtattctagctatgactttcaggctgtaactcttctcccccatgaacttgtc 755
Query: 421 cttcccactctgttactgatgcttttttcatagagttgttaccttcagtggagcaaaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 cttcccactctgttactgatgcttttttcatagagttgttaccttcagtggagcaaaatt 695
Query: 481 tgtcttcttttgccattatgagttttgttcatcgtgcctcatttaaaaattccttctaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tgtcttcttttgccattatgagttttgttcatcgtgcctcatttaaaaattccttctaca 635
Query: 541 cacggatataaaaaagaagtcatttgcattttaaactaaaagtttttacagttt 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cacggatataaaaaagaagtcatttgcattttaaactaaaagtttttacagttt 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space: 574656
Effective search space used: 574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
