XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAT
AACTCACTTAAAGAGATACAGGAGAACACTGCTAAAGAGTTACAAGTCCT
TAAAGAAAAACAGGAAAACACTGCTAAAGAGTTACAAGTCCTTAAAGAAA
AACAGGAAAACACAACCAAACAGGTAGAAGTCCTTATAGAAAAACAGGAA
AACACATCCAAACAGGTGATGGAAATGAACAAAACCATACTAGACCTAAA
AAGGGAAGTAGACACAATAAAGAAAACCCAAAGTGAGGCAACGCTGGCGA
TAGAAACCCTAGGAAAGAAATCTGGAAACATAGATGCCAGCATCAGCAAC
AGAATACAAGAGATGGAAGAGAGAATCTCAGGTGCAGAAGACTTCATAGA
GAACATCGGCACAACAATCAAAGAAAATGGAAAATGCAAAAAGATCCTAA
CTCAAAACATCCAGGAAATCCAGGACACAATGAGAACACCAAACCTACGG
ATAATAAGAGTGGATGAGAATGAAGATTTTCAACTCAAAGGACCAGCAAA
CATCTTCAACAAAATTATTGAAGAAAACTTCCCAAATCTAAAGAAAGAGA
TGCCCATGAACATACAAGAAGCCTACAGAACTCCAAATAGACTGGACCAG
AAAAGAAATTCCTCCCGACACATAATAATCAGAACAACAAATGCACTAAA
TAAAGATAGAATACTAAAAGCAGTAAAGGAAAAAGGTCAAGTAACATATA
AAGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCTTTAATTCCCATTGCTCTCCTGTACCCTGCTC
ATTGATTTTGAGATTGTCTTCCTACTTATGAAGAAACTTTGTGAAGGAAC
AAAGAAGTTATAAGTATCTTTCCTTGGTTTTAAATATAAATTTTAATGTA
CAGAGTAGAACGTCATTACATTCTCTGGAACTCGAGTTACAATGTCAGCC
TCTGCCAAAGGTGCTGAGAACAAATCTCAGGTCCAGTAGGAGAGGATTAA
GTGTTCTTAACCCTGAGCCATGTGCCCAGCCCTGTAGTTACTTTACTAAG
GAGGATGTAGACAATGACCCAAAAAATTCCTAGCAGCCCATGTTGATGCA
CAGAGTTCATTCTATCCCAGAGAGTGAAAATCAGACTACCTTTGCTTTCT
GATGCCAATGGAAGAGTTCCACACAGTGGAGAATTAATTATTATCCTATG
AGTCAGAGAAAAGAAGTACCAGCCATTGGCCATAAGTGCACTGAAATCAA
TGCATTGGCAGAGATGTGGCTTTTCTTCAGGGGGAGGTTCTCCTATCAGA
ACTTGAAACCAACAGAGCTGGAATGTAAATGTGTTTGGAGGGCTTTGCTA
TGCTAGAGGCAGGGCAATCAGGAGCCTGGTACCATCACTGTACAGGTGAT
TTTTCTGAAAGAATAAACCACTAACTAGGTTTAGTGCAATAATTATACAG
CAA

Query= MSMg01no534_c20.g1 MSMg01no534_c20.g1 CHROMAT_FILE:
MSMg01no534_c20.g1 PHD_FILE: MSMg01no534_c20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:35 2005
         (670 letters)



>mm_chr1_31554613_31555682
          Length = 1070

 Score = 1280 bits (662), Expect = 0.0
 Identities = 668/670 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctttaattcccattgctctcctgtaccctgctcattgattttgagattgtcttcctactt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttaattcccattgctctcctgtaccctgctcattgattttgagattgtcttcctactt 260

                                                                       
Query: 61  atgaagaaactttgtgaaggaacaaagaagttataagtatctttccttggttttaaatat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgaagaaactttgtgaaggaacaaagaagttataagtatctttccttggttttaaatat 320

                                                                       
Query: 121 aaattttaatgtacagagtagaacgtcattacattctctggaactcgagttacaatgtca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaattttaatgtacagagtagaacgtcattacattctctggaactcgagttacaatgtca 380

                                                                       
Query: 181 gcctctgccaaaggtgctgagaacaaatctcaggtccagtaggagaggattaagtgttct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcctctgccaaaggtgctgagaacaaatctcaggtccagtaggagaggattaagtgttct 440

                                                                       
Query: 241 taaccctgagccatgtgcccagccctgtagttactttactaaggaggatgtagacaatga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaccctgagccatgtgcccagccctgtagttactttactaaggaggatgtagacaatga 500

                                                                       
Query: 301 cccaaaaaattcctagcagcccatgttgatgcacagagttcattctatcccagagagtga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cccaaaaaattcctagcagcccatgttgatgcacagagttcattctatcccagagagtga 560

                                                                       
Query: 361 aaatcagactacctttgctttctgatgccaatggaagagttccacacagtggagaattaa 420
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561 aaatcagactacctttgctttctgatgccaatggaagagttccacacaatggagaattaa 620

                                                                       
Query: 421 ttattatcctatgagtcagagaaaagaagtaccagccattggccataagtgcactgaaat 480
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttactatcctatgagtcagagaaaagaagtaccagccattggccataagtgcactgaaat 680

                                                                       
Query: 481 caatgcattggcagagatgtggcttttcttcagggggaggttctcctatcagaacttgaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caatgcattggcagagatgtggcttttcttcagggggaggttctcctatcagaacttgaa 740

                                                                       
Query: 541 accaacagagctggaatgtaaatgtgtttggagggctttgctatgctagaggcagggcaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 accaacagagctggaatgtaaatgtgtttggagggctttgctatgctagaggcagggcaa 800

                                                                       
Query: 601 tcaggagcctggtaccatcactgtacaggtgatttttctgaaagaataaaccactaacta 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcaggagcctggtaccatcactgtacaggtgatttttctgaaagaataaaccactaacta 860

                     
Query: 661 ggtttagtgc 670
           ||||||||||
Sbjct: 861 ggtttagtgc 870


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space:   699600
Effective search space used:   699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)