Query= MSMg01no534_g23.b1 MSMg01no534_g23.b1 CHROMAT_FILE:
MSMg01no534_g23.b1 PHD_FILE: MSMg01no534_g23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:57 2005
(404 letters)
>mm_chr1_96812866_96813669
Length = 804
Score = 764 bits (395), Expect = 0.0
Identities = 403/407 (99%), Gaps = 3/407 (0%)
Strand = Plus / Minus
Query: 1 gaaaatgagttggaaggagtgtctgtaggttaaaaagaataatgtagttatattttaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gaaaatgagttggaaggagtgtctgtaggttaaaaagaataatgtagttatattttaata 412
Query: 61 ataggttatttaagagtaaatattccagatgaaatgactattgattatatgataagaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ataggttatttaagagtaaatattccagatgaaatgactattgattatatgataagaagg 352
Query: 121 atcattgtgccaccaataaacataccatgctattagggtgaaggtatcctgaccatcctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atcattgtgccaccaataaacataccatgctattagggtgaaggtatcctgaccatcctg 292
Query: 181 cttacacagtggccttattgatagatgctttctgtacatttcttgaaaaagatagagaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 cttacacagtggccttattgatagatgctttctgtacatttcttgaaaaagatagagaat 232
Query: 241 tttcttgcacttgtcttcagtaagtcaca---aatgtgtttgaatgtgtgttgtgtgtgt 297
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 231 cttcttgcacttgtcttcagtaagtcacaaagaatgtgtttgaatgtgtgttgtgtgtgt 172
Query: 298 atgcagatatgtatgtgcatgtgtgtttgtatgtgtgtgtgtttgtgtgtgtgcgtgtgt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 atgcagatatgtatgtgcatgtgtgtttgtatgtgtgtgtgtttgtgtgtgtgcgtgtgt 112
Query: 358 gtatgtgtgtgtgcatgtatgtgtatatgtgtgtgtgcatgtgtgtg 404
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 gtatgtgtgtgtgcatgtatgtgtatatgtgtgtgtgcatgtgtgtg 65
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no534_g23.g1 MSMg01no534_g23.g1 CHROMAT_FILE:
MSMg01no534_g23.g1 PHD_FILE: MSMg01no534_g23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:57 2005
(159 letters)
>mm_chr1_96656752_96657309
Length = 558
Score = 279 bits (144), Expect = 8e-80
Identities = 152/155 (98%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 1 atttacaaatatgctagtgtgtttctgacattcttttagtatgaatcttccaaaaatcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttacaaatatgctagtgtgtttctgacattcttttagtatgaatcttccaaaaatcca 260
Query: 61 acacttctttgctagggttctcagaaaattcctgcccacagaatctagagttctcaagag 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atacttctttgctagggttctcagaaaattcctgcccacagaatctagagttctcaagag 320
Query: 121 acaaagggatttctgaccngtcagagaaaacatgt 155
|||||||||||||||||| |||||||||||||||
Sbjct: 321 acaaagggatttctgacct-tcagagaaaacatgt 354
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 159
Length of database: 558
Length adjustment: 8
Effective length of query: 151
Effective length of database: 550
Effective search space: 83050
Effective search space used: 83050
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
