Query= MSMg01no534_h11.b1 MSMg01no534_h11.b1 CHROMAT_FILE:
MSMg01no534_h11.b1 PHD_FILE: MSMg01no534_h11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:00 2005
(664 letters)
>mm_chr1_98769072_98770136
Length = 1065
Score = 1228 bits (635), Expect = 0.0
Identities = 656/663 (98%), Gaps = 1/663 (0%)
Strand = Plus / Plus
Query: 3 ataatagtacttttacctgccaaccttcctagaaacaaatctttcctcatcagctacatt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ataatagtacttttacctgccaaccttcctagaaacaaatctttcctcatcagctacatt 262
Query: 63 cacaaggcaacatagccttccttttagttttagtttctccaaactgaagggatgacaaaa 122
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 263 cacaaggcaacatagccttccttttagttttagtttctccaaactgaaggaatgacaaaa 322
Query: 123 ctttgaaaacacatccatggcattctctggtgaaagtgatgaacattatgtaaaaaatgt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctttgaaaacacatccatggcattctctggtgaaagtgatgaacattatgtaaaaaatgt 382
Query: 183 gcaatatgaaacaagaaaactgattgaaaacattgatacaattttatgattgacactcat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gcaatatgaaacaagaaaactgattgaaaacattgatacaattttatgattgacactcat 442
Query: 243 tccagtctctttatttactaagtcactgatcatcaggaagtatttatttcccgtatgcta 302
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 443 tccagtctctttatttactaagtcactgatcatcaggatgtatttatttcccgtatgcta 502
Query: 303 aacactgttgggagtctggaagagtctactcaccaggacaagctggcaaatacctcaaac 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aacactgttgggagtctggaagagtctactcaccaggacaagctggcaaatacctcaaac 562
Query: 363 actgtgctgctcacagcccaataggaagcaatccctaagaatgcatacacagagtactct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 actgtgctgctcacagcccaataggaagcaatccctaagaatgcatacacagagtactct 622
Query: 423 ataagactaccataaattctctcttataaaatcttttttttggggggggc-attgtaaat 481
|||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 623 ataagaataccataaattctctcttataaaatcttttttttggggggggggattgtaaat 682
Query: 482 tttgtacttagtgggttgagtgattgcgatgtaagccacatatatgactttgaggagtca 541
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tttgtacttagtgagttgagtgattgcgatgtaagccacatatatgactttgaggagtca 742
Query: 542 aaaagtagtctggattgccactggacctggacgagcagagagaggtaaggactgctgtgt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 aaaagtagtctggattgccactggacctggacgagcagagagaggtaaggactgctgtgt 802
Query: 602 tcactgttattggcctttaagtgagtgtaattgctgttacatacgattcacacattgaag 661
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 803 tcactgttattggcctttaagtgagtgtaattgctgttacatacgcttcacacattgaag 862
Query: 662 aat 664
|||
Sbjct: 863 aat 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1065
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1055
Effective search space: 689970
Effective search space used: 689970
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no534_h11.g1 MSMg01no534_h11.g1 CHROMAT_FILE:
MSMg01no534_h11.g1 PHD_FILE: MSMg01no534_h11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:00 2005
(647 letters)
>mm_chr1_98891210_98892256
Length = 1047
Score = 1251 bits (647), Expect = 0.0
Identities = 647/647 (100%)
Strand = Plus / Minus
Query: 1 tggaacaacattatatttagaaatacaagctgggttccaggtttttattttttatggctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 tggaacaacattatatttagaaatacaagctgggttccaggtttttattttttatggctt 964
Query: 61 caattttagaaactagataaaacatccatttgtgttcttttaattcttgataaattgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 caattttagaaactagataaaacatccatttgtgttcttttaattcttgataaattgata 904
Query: 121 cacagtatgcttaaaaacagtgatgagttaataaaaaataatttatctttaataaactaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 cacagtatgcttaaaaacagtgatgagttaataaaaaataatttatctttaataaactaa 844
Query: 181 tagaggaagtcacaagtagcttctaaaattcgagtgaaaatattcatgggtagtaaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 tagaggaagtcacaagtagcttctaaaattcgagtgaaaatattcatgggtagtaaaatt 784
Query: 241 aatttataggttttactcattcataatattataaatcaggataaattaaagatttctttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 aatttataggttttactcattcataatattataaatcaggataaattaaagatttctttg 724
Query: 301 attatgatggttatctagcttgtcggttaaaatgtgtttattgccctttttcttttcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 attatgatggttatctagcttgtcggttaaaatgtgtttattgccctttttcttttcttt 664
Query: 361 gacttttttaggtactatatctggtctcactcgtgtgagtactggaaattttgagaagga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gacttttttaggtactatatctggtctcactcgtgtgagtactggaaattttgagaagga 604
Query: 421 tttttatctgtcaagggcagagaaagttatattgaccatctcttatgatctggcatcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tttttatctgtcaagggcagagaaagttatattgaccatctcttatgatctggcatcttt 544
Query: 481 attggtagcaatacttgtagcgcactatggaggtaaagggagccggtcaaaatggttggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 attggtagcaatacttgtagcgcactatggaggtaaagggagccggtcaaaatggttggc 484
Query: 541 agcagctgcccttctagtagggctcgcatcaatcttatttgccgttccatacttgaaata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 agcagctgcccttctagtagggctcgcatcaatcttatttgccgttccatacttgaaata 424
Query: 601 tgaaattgtacgtccagtggaagatagtgaaggtgagattttccaaa 647
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tgaaattgtacgtccagtggaagatagtgaaggtgagattttccaaa 377
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
