Query= MSMg01no534_n14.b1 MSMg01no534_n14.b1 CHROMAT_FILE:
MSMg01no534_n14.b1 PHD_FILE: MSMg01no534_n14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:29 2005
(604 letters)
>mm_chr1_37435231_37436234
Length = 1004
Score = 1127 bits (583), Expect = 0.0
Identities = 595/599 (99%), Gaps = 2/599 (0%)
Strand = Plus / Plus
Query: 7 attctttagccccttctaatcttcctct-accccttctgggataaacaggtctcaagcag 65
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 207 attctttagccccttctaatcttcct-tgaccccttctgggataaacaggtctcaagcag 265
Query: 66 cccccatgtgctctagtcttgcaggaaagttcttgctgagattgtcccatgttgcctttg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cccccatgtgctctagtcttgcaggaaagttcttgctgagattgtcccatgttgcctttg 325
Query: 126 tatttagatacccttgagaatgcttcttagcaggctgcatggaacaggatgggtgggagg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tatttagatacccttgagaatgcttcttagcaggctgcatggaacaggatgggtgggagg 385
Query: 186 aacttagcctttgcctccccccttctgcaagagagcacactgagcagccctggtttgtgt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aacttagcctttgcctccccccttctgcaagagagcacactgagcagccctggtttgtgt 445
Query: 246 gaacctgcagactcggcagttggtgactgtctgtgactgtaagctgctggccaactccat 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gaacctgcagactcggcagttggtgactgtctgtgactgtaagctgctggccaactccat 505
Query: 306 ccatgggctgaatgcagctcggcccgactacatcgcttccaaggcctcccctacctcgac 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ccatgggctgaatgcagctcggcccgactacatcgcttccaaggcctcccctacctcgac 565
Query: 366 tgaggaggagcaggtgatgcttcggaatgaccaggacaccctgatggccaggtgggcggg 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tgaggaggagcaggtgatgcttcggaatgaccaggacaccctgatggccaggtgggcggg 625
Query: 426 gagaagcagccggtcttccctgcaggtggactggcatgaggaggagtgggtgagtctgct 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gagaagcagccggtcttccctgcaggtggactggcatgaggaggagtgggtgagtctgct 685
Query: 486 gcccctgcctggggtcctgctgctgaactatagaccttccctcccagagtgccagctcct 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gcccctgcctggggtcctgctgctgaactatagaccttccctcccagagtgccagctcct 745
Query: 546 ttgttagcaagctccaggtctgcttcccaggtggctttgggccacttgatattgaggtt 604
|||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 746 ttgttagcaagctccaggtctgcttctcaggtggctttgggctacttgatattgaggtt 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no534_n14.g1 MSMg01no534_n14.g1 CHROMAT_FILE:
MSMg01no534_n14.g1 PHD_FILE: MSMg01no534_n14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:30 2005
(631 letters)
>mm_chr1_37574155_37575185
Length = 1031
Score = 638 bits (330), Expect = 0.0
Identities = 354/364 (97%), Gaps = 4/364 (1%)
Strand = Plus / Minus
Query: 272 gaaggttcaaaagtcctgccaacactgggtgcagcttgtgaaaacacaaatttgtttgaa 331
||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||
Sbjct: 1031 gaaggttcaaaagtcctgccaacactgagtccagcttgtgaaaacataaatttgtttgaa 972
Query: 332 cagaaacatcttaactgagcgtgtggccagggctgggaagggcttcctggctccctgaaa 391
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 971 cagaaacatcttaactgagcgtgtggccagggctggggagggcttcctggctccctgaaa 912
Query: 392 gtacatccctggaagagtcattcctatggtaagcgcatggaagctggtacagctgtgttc 451
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 gtacatctctgggagagtcattcctatggtaagcgcatggaagctggtacagctgtgttc 852
Query: 452 agcgagggcagacat----cagtctgctcaagggaaatgatctttgctcctttttccctg 507
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 agcgagggcagacatcatacagtctgctcaagggaaatgatctttgctcctttttccctg 792
Query: 508 atgggacccaggggtcaaggtagcctgggtttccttatctgtatgtgggattaagagtca 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 atgggacccaggggtcaaggtagcctgggtttccttatctgtatgtgggattaagagtca 732
Query: 568 agtatccatgggcatgccagagacctgcttaaggttacctaccttaaggaaagtgtcttt 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 agtatccatgggcatgccagagacctgcttaaggttacctaccttaaggaaagtgtcttt 672
Query: 628 tgat 631
||||
Sbjct: 671 tgat 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
