MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-537D06
Chromosome	1 (Build37)
Map Location	23,294,084 - 23,294,267
singlet/doublet	singlet
Overlap gene	EG623356
Upstream gene	Rims1, Rims1, EG665725, LOC665731, 4933415F23Rik, Rn4.5s-ps4
Downstream gene	Ogfrl1, LOC665782, B3gat2, Smap1, 1110058L19Rik, 4921533L14Rik, LOC665808, Col9a1, Col19a1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Rims1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:116837 MGI:2152971
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 5 mRNAs

name	Rims1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:116837 MGI:2152971
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 5 mRNAs

name	EG665725 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665725 MGI:3646486
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	LOC665731 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665731
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	4933415F23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66755 MGI:1914005
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 22 ESTs, 12 Proteins

name	Rn4.5s-ps4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19803 MGI:97945
definition	note : 4.5s RNA, pseudogene 4 pseudo : _no_value

name	EG623356 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:623356 MGI:3644588
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Ogfrl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70155 MGI:1917405
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665782 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665782
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 17 Proteins pseudo : _no_value

name	B3gat2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:280645 MGI:2389490
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98366 MGI:2138261
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1110058L19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68002 MGI:1915252
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4921533L14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68187 MGI:1915437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665808 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665808
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Col9a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12839 MGI:88465
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Col19a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12823 MGI:1095415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rims1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:60592785 GeneID:116837 MGI:2152971
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulating synaptic membrane exocytosis 1 transcript_id : NM_001012625.1

name	Rims1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:60592775 GeneID:116837 MGI:2152971
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulating synaptic membrane exocytosis 1 transcript_id : NM_001012624.1

name	Rims1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:60592781 GeneID:116837 MGI:2152971
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulating synaptic membrane exocytosis 1 transcript_id : NM_001012623.1

name	Rims1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:60460914 GeneID:116837 MGI:2152971
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulating synaptic membrane exocytosis 1 transcript_id : NM_183018.2

name	Rims1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:57528311 GeneID:116837 MGI:2152971
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulating synaptic membrane exocytosis 1 transcript_id : NM_053270.1

name	Rims1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:60592781 GeneID:116837 MGI:2152971
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 5 mRNAs product : regulating synaptic membrane exocytosis 1 transcript_id : NM_001012623.1

name	EG665725 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233778 GeneID:665725 MGI:3646486
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : predicted gene, EG665725 transcript_id : XM_979023.2

name	4933415F23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233766 GeneID:66755 MGI:1914005
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 22 ESTs, 12 Proteins product : RIKEN cDNA 4933415F23 gene transcript_id : XM_001474610.1

name	EG623356 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233768 GeneID:623356 MGI:3644588
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG623356 transcript_id : XM_887803.3

name	Ogfrl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487292 GeneID:70155 MGI:1917405
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : opioid growth factor receptor-like 1 transcript_id : NM_001081079.1

name	B3gat2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46909608 GeneID:280645 MGI:2389490
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) transcript_id : NM_172124.2

name	Smap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130506 GeneID:98366 MGI:2138261
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stromal membrane-associated protein 1 transcript_id : NM_028534.2

name	1110058L19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376292 GeneID:68002 MGI:1915252
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110058L19 gene transcript_id : NM_026503.2

name	4921533L14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47271529 GeneID:68187 MGI:1915437
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921533L14 gene transcript_id : NM_026604.3

name	Col9a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982451 GeneID:12839 MGI:88465
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type IX, alpha 1 transcript_id : NM_007740.2

name	Col19a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326514 GeneID:12823 MGI:1095415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type XIX, alpha 1 transcript_id : NM_007733.2

name	Rims1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60592786 GeneID:116837 MGI:2152971
definition	GO_component : GO:0045202 - synapse [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0017137 - Rab GTPase binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006887 - exocytosis [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0048169 - regulation of long-term neuronal synaptic plasticity [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : isoform 5 is encoded by transcript variant 5; Rab3 effector; Rab3 interacting protein 1; Rim1delta56-105; Rim1delta83-105; synaptic exocytosis regulator 1 product : regulating synaptic membrane exocytosis 1 isoform 5 protein_id : NP_001012643.1

name	Rims1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60592776 GeneID:116837 MGI:2152971
definition	GO_component : GO:0045202 - synapse [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0017137 - Rab GTPase binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006887 - exocytosis [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0048169 - regulation of long-term neuronal synaptic plasticity [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : isoform 4 is encoded by transcript variant 4; Rab3 effector; Rab3 interacting protein 1; Rim1delta56-105; Rim1delta83-105; synaptic exocytosis regulator 1 product : regulating synaptic membrane exocytosis 1 isoform 4 protein_id : NP_001012642.1

name	Rims1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60592782 GeneID:116837 MGI:2152971
definition	GO_component : GO:0045202 - synapse [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0017137 - Rab GTPase binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006887 - exocytosis [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0048169 - regulation of long-term neuronal synaptic plasticity [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : isoform 3 is encoded by transcript variant 3; Rab3 effector; Rab3 interacting protein 1; Rim1delta56-105; Rim1delta83-105; synaptic exocytosis regulator 1 product : regulating synaptic membrane exocytosis 1 isoform 3 protein_id : NP_001012641.1

name	Rims1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60460915 GeneID:116837 MGI:2152971
definition	GO_component : GO:0045202 - synapse [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0017137 - Rab GTPase binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006887 - exocytosis [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0048169 - regulation of long-term neuronal synaptic plasticity [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : isoform 2 is encoded by transcript variant 2; Rab3 effector; Rab3 interacting protein 1; Rim1delta56-105; Rim1delta83-105; synaptic exocytosis regulator 1 product : regulating synaptic membrane exocytosis 1 isoform 2 protein_id : NP_898839.2

name	Rims1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:57528312 GeneID:116837 MGI:2152971
definition	GO_component : GO:0045202 - synapse [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0017137 - Rab GTPase binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006887 - exocytosis [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0048169 - regulation of long-term neuronal synaptic plasticity [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : isoform 1 is encoded by transcript variant 1; Rab3 effector; Rab3 interacting protein 1; Rim1delta56-105; Rim1delta83-105; synaptic exocytosis regulator 1 product : regulating synaptic membrane exocytosis 1 isoform 1 protein_id : NP_444500.1

name	Rims1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60592782 GeneID:116837 MGI:2152971
definition	GO_component : GO:0045202 - synapse [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0017137 - Rab GTPase binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006887 - exocytosis [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0048169 - regulation of long-term neuronal synaptic plasticity [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : isoform 3 is encoded by transcript variant 3; Rab3 effector; Rab3 interacting protein 1; Rim1delta56-105; Rim1delta83-105; synaptic exocytosis regulator 1 product : regulating synaptic membrane exocytosis 1 isoform 3 protein_id : NP_001012641.1

name	EG665725 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363246 GeneID:665725 MGI:3646486
definition	codon_start : 1 product : hypothetical protein protein_id : XP_984117.1

name	4933415F23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233767 GeneID:66755 MGI:1914005
definition	codon_start : 1 product : hypothetical protein LOC66755 protein_id : XP_001474660.1

name	EG623356 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233769 GeneID:623356 MGI:3644588
definition	codon_start : 1 product : hypothetical protein protein_id : XP_892896.3

name	Ogfrl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487293 GeneID:70155 MGI:1917405
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : opioid growth factor receptor-like 1 protein_id : NP_001074548.1

name	B3gat2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46909609 CCDS:CCDS14850.1 GeneID:280645 MGI:2389490
definition	EC_number : 2.4.1.135 GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015018 - galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity [Evidence ISS]; GO:0015020 - glucuronosyltransferase activity [Evidence TAS]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence ISS] GO_process : GO:0016051 - carbohydrate biosynthesis [Evidence ISS] codon_start : 1 note : UDP-glucuronosyltransferase-S product : galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2 protein_id : NP_742122.2

name	Smap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28077013 CCDS:CCDS14851.1 GeneID:98366 MGI:2138261
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045648 - positive regulation of erythrocyte differentiation [Evidence IDA]; GO:0043087 - regulation of GTPase activity [Evidence IEA] codon_start : 1 product : stromal membrane-associated protein 1 protein_id : NP_082810.1

name	1110058L19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385990 CCDS:CCDS14852.1 GeneID:68002 MGI:1915252
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC68002 protein_id : NP_080779.1

name	4921533L14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47271530 CCDS:CCDS14853.1 GeneID:68187 MGI:1915437
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC68187 protein_id : NP_080880.3

name	Col9a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982452 GeneID:12839 MGI:88465
definition	GO_component : GO:0005581 - collagen [Evidence IEA]; GO:0005737 - cytoplasm [Evidence IEA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0030020 - extracellular matrix structural constituent conferring tensile strength [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : alpha 1 type IX collagen short form product : procollagen, type IX, alpha 1 protein_id : NP_031766.2

name	Col19a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326515 CCDS:CCDS14854.1 GeneID:12823 MGI:1095415
definition	GO_component : GO:0005581 - collagen [Evidence IEA]; GO:0005737 - cytoplasm [Evidence IEA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0030198 - extracellular matrix organization and biogenesis [Evidence IMP]; GO:0006817 - phosphate transport [Evidence IEA]; GO:0007519 - striated muscle development [Evidence IMP] codon_start : 1 product : procollagen, type XIX, alpha 1 protein_id : NP_031759.2

name	LOC665731 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665731
definition	number : 4 pseudo : _no_value

name	LOC665731 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665731
definition	number : 3 pseudo : _no_value

name	LOC665731 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665731
definition	number : 2 pseudo : _no_value

name	LOC665731 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665731
definition	number : 1 pseudo : _no_value

name	LOC665808 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665808
definition	number : 1 pseudo : _no_value

name	LOC665808 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665808
definition	number : 2 pseudo : _no_value

name	LOC665808 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665808
definition	number : 3 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:167261
definition	standard_name : D1Ertd228e

name	(CDS detail)
type	STS
link
xref	UniSTS:126883
definition	standard_name : D12Mit63

name	(CDS detail)
type	STS
link
xref	UniSTS:123743
definition	standard_name : 26.MMHAP56FRA11.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128800
definition	standard_name : D1Mit431

name	(CDS detail)
type	STS
link
xref	UniSTS:124545
definition	standard_name : RH118239

name	(CDS detail)
type	STS
link
xref	UniSTS:125484
definition	standard_name : MTH1019

name	(CDS detail)
type	STS
link
xref	UniSTS:128453
definition	standard_name : D1Mit120

name	(CDS detail)
type	STS
link
xref	UniSTS:493191
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:122822
definition	standard_name : 05.MMHAP59FLB2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:234081
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234080
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234084
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:232862
definition	standard_name : RH143616

name	(CDS detail)
type	STS
link
xref	UniSTS:123281
definition	standard_name : 15.MMHAP94FRE9.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:158779
definition	standard_name : AI462175

name	(CDS detail)
type	STS
link
xref	UniSTS:161307
definition	standard_name : RH124485

name	(CDS detail)
type	STS
link
xref	UniSTS:178363
definition	standard_name : AI847425

name	(CDS detail)
type	STS
link
xref	UniSTS:164109
definition	standard_name : AI835491

name	(CDS detail)
type	STS
link
xref	UniSTS:261869
definition	standard_name : AI555249

name	(CDS detail)
type	STS
link
xref	UniSTS:124266
definition	standard_name : 38.MMHAP23FLE5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128507
definition	standard_name : D1Mit169.2

name	(CDS detail)
type	STS
link
xref	UniSTS:128506
definition	standard_name : D1Mit169

name	(CDS detail)
type	STS
link
xref	UniSTS:234085
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:478964
definition	standard_name : Col9a1

name	(CDS detail)
type	STS
link
xref	UniSTS:123334
definition	standard_name : 17.MMHAP18FRF8.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:158781
definition	standard_name : D17511

name	(CDS detail)
type	STS
link
xref	UniSTS:158780
definition	standard_name : AB000636

name	LOC665782 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233780 GeneID:665782
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 17 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudo : _no_value transcript_id : XR_032011.1

clone name	MSMg01-328O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436N18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-333P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217L23
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-537D06.T7 (MSMg01no537_d06.b1)	MSMg01-537D06.TJ (MSMg01no537_d06.g1)
ACC	AG604230	AG604231
length	783	766
length of high quality (start - end)	187 (51 - 237)	---
definition	CHROMAT_FILE: MSMg01no537_d06.b1 PHD_FILE: MSMg01no537_d06.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:15:31 2005	CHROMAT_FILE: MSMg01no537_d06.g1 PHD_FILE: MSMg01no537_d06.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:15:31 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NNNAAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CGCGGAATTCTCTCATCATTCTCCATTCATCTGAAACTGTAACATCACCA GAAATGGAGTAAAACTGCTAAACTAGCCTTTGAGTACCTCAGGTGTTATA AAATGATTAAATAACATAGTAACATCCTATGATGCCCCAGGCATGTTCTC TTAGAGTACCTATCCTTATAAGCACTTTCTGTGATACTNANTNTNNAAAN NNNNAAACCCCCCCCCNAAANAAAAAAAACCCCCCCCCAAAATTTTTTTT TTTTTTTTTTCCCCCCCTTCTTTATTTTTATCTTTTAATTTTATCCTTCT TCTTATTTTTTTTTTTTTTTTTTTTTATAAAAAAAAACTCCCCCCCCCTC CTTTTTCACATATACCACTTTTTTTTTTTTTTATTCCATTTCAAAAAATA TATTACTTTCTTTCTTTCACTTACACACTTTTTTTCATTTGATTTTTTTC GGGGTGGGTGTGTGTTCCCTTTTTACTTCTTACTCTTTCTTTTTTTTTTT TTAAATATTTTACTACTACTCTCGCCTCCCCTAATAATGTTTAAATTTTT TTACTATTTTCGATCCTCTCTCTTCCCCCTCATCTTTTCTACTCGTTATA TTTTTTTTTCTAAATTTTTATACTAACATTTTCCACACGCCAGTTTGTTG TTTGTGTGTGTTAATTTTATTTTAATCTCCTTTTTTTTTCCTTTTTTTAT CCTCTTTTTTTGTTATAATATCTTTTTTTAACN	NNNNNNNCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXGATCTCTGCGGNANNATTCTACTNNCCCT GGGNCAATTTNNCCCACCGGNNCTTCCTTGGGAAAAAAAGGGGTTTTGGC CNTTGTGAAAAGCCCTTTCCCCTTCCNAAGCACCCTGGGCCCCACCATCA CTTTCACAGGNNTCTTTCCTTGGAAAAGAATTGGTTGCCCTCAGTTCTTT GTTTTTAAAACTTAAACCTCTTCCCTGGCTACTCTTGTGGGTATGTCTTC CTTTCAGAATCAATAGCCCTTTTCACCAGAACCACATTGTTTAAAATTGA AAATCAAGGGTTCTGTGGGACCAAAATATTGGGGATAAAAACTGGAAAAA CCTCTCCCCAATAGGCATTACCCACATTTTTAAAAGGGGCCTGGCGCTTG GCCCACCCCTTTGTGGGATATAAATTGGGGGGAGAGGGGGGGCCCCAAAT CACATTTTTTTTGGAAAACAATTTTTGTTTTTTTTTATTTAAGGGGGGGG GGGAAAAAAAAAAAAAAGGGGGGTTTTTTTGTGGGGGCGGACTAATAAAA AAAAAAATAAATGGGGGGGGGCGCCCAAAAAGGGGGGGGGTGGGTTCAAA AAATTTGTGGGGGGCCCTCCTTTTTCTCTTTCTTTTTTAAAAAAAAAAAA TCGTGGCCAGAAAAAAAACCATGTTTTTATAAAAAAGGTTTTTTTTTTCG GAAAAAACAACCTTTN
quality values	Open. Hide. 0 0 0 3 6 6 6 14 11 8 8 8 15 15 29 37 39 39 39 37 32 37 23 18 9 9 9 22 22 41 28 28 28 28 25 27 27 16 9 6 6 7 6 6 8 12 13 16 20 19 28 32 37 37 35 36 35 35 36 36 50 41 37 37 37 37 33 21 15 6 6 6 10 10 28 29 31 31 31 31 31 48 48 48 48 57 59 59 59 59 50 50 47 47 47 47 47 47 47 43 43 51 68 68 68 68 68 68 68 68 68 68 54 54 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 51 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 54 54 54 54 50 53 59 59 57 57 53 53 53 53 57 57 59 59 59 59 59 59 53 50 50 50 37 37 37 37 23 23 3 0 3 0 3 0 3 0 0 3 19 3 0 0 0 0 0 3 7 6 10 11 21 16 14 9 9 9 3 0 3 17 3 0 3 17 12 15 17 16 15 15 10 12 8 8 8 8 14 10 11 10 13 13 15 14 16 19 23 25 28 31 33 33 33 37 32 23 10 8 8 8 8 6 8 8 19 22 24 10 8 8 8 8 8 8 8 8 10 8 9 9 15 10 11 11 8 8 8 8 8 8 10 10 9 9 9 9 11 12 12 8 8 8 8 8 8 8 8 8 9 12 8 8 10 22 28 34 22 11 8 9 8 10 9 12 16 13 13 10 10 10 10 10 16 17 20 12 12 8 8 8 8 16 25 19 15 9 8 8 8 8 8 8 9 13 11 10 8 8 8 10 7 9 10 10 8 8 8 8 10 10 15 19 19 15 10 9 9 14 12 12 9 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 11 12 15 18 13 13 8 8 8 8 8 6 7 7 6 8 8 10 10 10 11 8 8 9 9 8 8 8 8 8 6 8 8 8 13 12 12 12 11 8 8 6 8 8 8 8 8 8 8 11 8 11 6 6 6 6 7 6 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 10 8 8 12 10 10 12 11 10 6 6 8 8 8 8 8 8 8 10 9 10 13 13 17 30 30 33 37 30 18 15 10 10 9 9 11 12 10 10 10 8 8 8 9 8 8 8 8 8 8 8 10 10 8 11 11 13 15 18 15 10 8 8 8 8 8 8 10 8 10 8 8 8 8 8 8 12 19 25 30 15 15 9 10 8 8 9 8 10 8 8 8 8 8 9 8 8 8 8 8 8 8 8 8 10 10 10 9 11 10 8 8 8 8 10 10 15 11 7 11 6 6 8 8 8 8 8 9 9 9 10 10 11 17 21 31 24 17 9 11 11 10 8 8 11 12 15 15 11 6 6 8 10 10 10 8 8 8 7 6 8 8 9 9 10 10 11 11 11 6 6 6 6 8 8 15 11 13 13 13 13 8 8 10 7 9 11 7 7 7 6 10 6 6 8 6 8 8 10 10 10 15 8 8 8 11 8 8 8 8 9 11 11 11 14 14 14 14 17 10 10 11 13 16 22 19 23 24 12 8 6 6 8 8 12 10 11 11 11 15 10 6 6 8 8 8 10 10 10 8 8 8 8 8 8 8 11 11 10 10 10 10 3 0	Open. Hide. 0 0 0 0 0 0 0 3 7 6 6 8 13 9 9 8 8 3 0 3 17 21 41 41 44 37 37 37 37 37 39 50 50 50 50 50 42 39 27 22 9 9 9 9 9 9 11 17 19 30 23 30 30 27 18 17 3 0 3 17 19 33 33 37 37 37 39 39 22 12 12 10 9 12 7 7 7 7 12 9 15 3 0 3 0 0 3 14 15 30 59 27 25 3 0 0 3 14 14 12 8 8 3 0 3 12 12 12 13 3 0 0 3 7 10 24 22 12 16 3 0 0 3 7 7 15 8 8 10 14 13 21 27 32 35 25 10 8 8 8 9 12 11 11 9 17 10 12 7 8 3 0 3 8 8 8 8 8 8 8 8 8 8 11 8 11 13 13 13 16 29 21 21 10 10 3 0 3 11 15 32 19 14 13 13 11 10 9 11 11 10 10 9 11 11 17 37 41 39 18 11 11 11 11 11 13 21 17 11 3 0 0 3 8 7 16 21 15 15 10 8 8 8 8 10 12 10 8 8 8 8 8 8 8 7 7 7 10 10 10 10 10 12 11 11 11 8 9 8 11 9 9 9 18 15 15 15 13 21 14 11 10 11 10 11 11 13 12 13 10 10 10 12 12 14 11 9 9 9 10 10 10 10 10 10 9 9 9 9 16 11 11 11 15 8 8 8 8 8 8 11 12 17 14 10 8 8 8 8 8 8 8 11 11 10 11 6 7 6 8 8 9 7 6 6 6 6 6 10 10 9 9 9 9 9 9 9 10 10 10 10 12 15 17 15 13 11 11 10 10 10 16 10 10 10 9 9 11 10 10 9 9 10 6 6 6 6 6 6 8 8 8 8 8 9 8 8 8 8 8 8 8 8 10 11 11 11 17 17 11 6 6 6 7 7 9 12 8 8 8 8 6 6 6 6 6 7 12 13 9 8 8 8 8 8 8 8 8 8 8 11 11 8 8 8 8 8 8 9 16 16 13 10 9 9 9 9 10 9 9 9 9 6 6 6 6 6 6 10 10 11 11 8 6 6 6 7 7 10 8 6 6 6 6 6 7 8 8 8 8 8 8 10 8 8 8 8 9 9 15 11 6 6 6 6 6 12 12 19 11 10 10 9 9 9 11 8 8 8 8 8 8 11 11 11 12 12 16 16 8 8 8 8 8 8 9 12 9 9 9 12 10 15 12 14 9 9 9 12 12 32 37 37 13 9 8 8 6 6 9 9 9 9 9 9 17 26 37 30 25 15 11 12 13 9 10 10 14 12 10 10 8 9 9 9 10 8 10 10 16 12 12 12 21 20 30 24 14 17 11 10 10 10 16 14 12 9 7 7 8 7 7 7 10 10 11 11 15 15 19 19 19 19 14 13 9 6 6 6 6 6 9 9 12 9 15 11 10 9 8 8 8 8 6 6 6 6 8 8 6 6 6 8 9 21 18 17 10 10 8 8 8 8 8 8 8 8 10 10 10 11 11 8 8 8 8 8 8 8 17 11 9 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 6 7 8 8 8 8 11 13 23 28 23 21 21 22 13 11 8 8 8 8 10 10 10 10 6 6 6 6 10 10 18 18 15 13 10 6 8 6 6 8 6 9 10 10 10 10 6 6 6 17 23 23 22 13 11 10 10 13 14 22 25 30 34 21 19 11 11 11 10 10 10 10 10 7 6 6 6 6 6 8 9 9 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no537_d06.b1 MSMg01no537_d06.b1 CHROMAT_FILE:
MSMg01no537_d06.b1 PHD_FILE: MSMg01no537_d06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:31 2005
         (187 letters)



>mm_chr1_23293881_23294467
          Length = 587

 Score =  340 bits (176), Expect = 2e-98
 Identities = 182/184 (98%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctctcatcattctccattcatctgaaactgtaacatcaccagaaatggagtaaa 63
           ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ggaattctctcatcattcagcattcatctgaaactgtaacatcaccagaaatggagtaaa 328

                                                                       
Query: 64  actgctaaactagcctttgagtacctcaggtgttataaaatgattaaataacatagtaac 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 actgctaaactagcctttgagtacctcaggtgttataaaatgattaaataacatagtaac 268

                                                                       
Query: 124 atcctatgatgccccaggcatgttctcttagagtacctatccttataagcactttctgtg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atcctatgatgccccaggcatgttctcttagagtacctatccttataagcactttctgtg 208

               
Query: 184 atac 187
           ||||
Sbjct: 207 atac 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 587
Length adjustment: 8
Effective length of query: 179
Effective length of database: 579
Effective search space:   103641
Effective search space used:   103641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information