Query= MSMg01no537_d15.b1 MSMg01no537_d15.b1 CHROMAT_FILE:
MSMg01no537_d15.b1 PHD_FILE: MSMg01no537_d15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:32 2005
(668 letters)
>mm_chr1_132122175_132123243
Length = 1069
Score = 1251 bits (647), Expect = 0.0
Identities = 659/663 (99%), Gaps = 1/663 (0%)
Strand = Plus / Minus
Query: 7 gaattctatttatattactatacttttgtagacgtggaataagaaccttctagacactga 66
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 gaattctatttataagactatacttttgtagacgtggaataagaaccttctagacactga 734
Query: 67 gttctgaggaacccagctgtaaggagctgcagggagctagttccttttgcttgtgaaggg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 gttctgaggaacccagctgtaaggagctgcagggagctagttccttttgcttgtgaaggg 674
Query: 127 ctttacactttacagtatgaaaggctattggtgattcagcacaacagtgtgatatttacc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ctttacactttacagtatgaaaggctattggtgattcagcacaacagtgtgatatttacc 614
Query: 187 actagcca-gttttcccaggaggattgttaagataaccttgaatctttgggacagcaagt 245
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 actagccatgttttcccaggaggattgttaagataaccttgaatctttgggacagcaagt 554
Query: 246 tatcaactacttcttcctttatcgtcaacaaaaaggcttcagtcatcaatgtgtgcctac 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tatcaactacttcttcctttatcgtcaacaaaaaggcttcagtcatcaatgtgtgcctac 494
Query: 306 acagtgagtttctttctaagtcttttctcagtattctgctttcaaattttcaggattgta 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 acagtgagtttctttctaagtcttttctcagtattctgctttcaaattttcaggattgta 434
Query: 366 tttatgaatccatttatgtcactatcatgatcacagaaaatggttaatcaattgttctaa 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tttatgaatccatttatgtcactatcatgatcacagaaaatggttaatcaattgttctaa 374
Query: 426 tgagcccaacagtcttaggagtggctccaaactttgttcagttttggaaaacacatatta 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tgagcccaacagtcttaggagtggctccaaactttgttcagttttggaaaacacatatta 314
Query: 486 atagattgtgattgttgtccattgtagcatgtgttaatctttacacatttttacagaaaa 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 atagattgtgattgttgtccattgtagcatgtgttaatctttacacatttttacagaaaa 254
Query: 546 ggataacccataacccaatggtattagtggataaggctataagtgaaaatgtcactttta 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ggataacccataacccaatggtattagtggataaggctataagtgaaaatgtcactttta 194
Query: 606 tttcctctgatgaagtgatgagataaaagccatatctgagttttatagatacatggcttg 665
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 193 tttcctctgatgaagtgatgagataaaagccatatccgagttttatagatacatggcttg 134
Query: 666 gac 668
|||
Sbjct: 133 gac 131
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1069
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1059
Effective search space: 696822
Effective search space used: 696822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_d15.g1 MSMg01no537_d15.g1 CHROMAT_FILE:
MSMg01no537_d15.g1 PHD_FILE: MSMg01no537_d15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:33 2005
(645 letters)
>mm_chr1_131987383_131988427
Length = 1045
Score = 872 bits (451), Expect = 0.0
Identities = 460/463 (99%)
Strand = Plus / Plus
Query: 1 ttgagacaggttgtggggatttattttgaatttggaatgttgtatctacataataagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgagacaggttgtggggatttattttgaatttggaatgttgtatctacataataagatg 260
Query: 61 cctcagggatgggagccaagtccatacagaaaaatcatctgtgtttgtacacataaactg 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctcggggatgggagccaagtccatacagaaaaatcatctgtgtttgtacacataaactg 320
Query: 121 aagctaatatatgcagtatttacagtatacccatattttaattgcaacctatctcatgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagctaatatatgcagtatttacagtatacccatattttaattgcaacctatctcatgag 380
Query: 181 gtaagacatggactgtttgacctgtgatatcatatgggaggtcaaaaatgcagatcttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaagacatggactgtttgacctgtgatatcatatgggaggtcaaaaatgcagatcttat 440
Query: 241 aatatttcatattctggaaaacacattggggatatttgatgtatatggaaattttaatta 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatatttcatattctggaaagcacattggggatatttgatgtatatggaaattttaatta 500
Query: 301 aaccatgccacttggcagtggtggtgcatgcctttaatcacagcacctgggaggaggagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaccatgccacttggcagtggtggtgcatgcctttaatcacagcacctgggaggaggagc 560
Query: 361 aggtggatttctgagttcgatgccagctggtctacagagtgagttccaggacagccaggg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 561 aggtggatttctgagttcgatgccagctggtctacagagtgagttccaggacagtcaggg 620
Query: 421 atatacagagaaacctgtctcaaaagaacaaaagaaaaaagaa 463
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atatacagagaaacctgtctcaaaagaacaaaagaaaaaagaa 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
