XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAC
ACTTTCACACACAAATAAAAATCATAAAATAAGGAAAGCAAACTTAAGGA
GAAGGGGCTTATTTTGGCTATGATTCCAGTGGCATATAGTCTATCATGAC
AGAGACGACATGAGGCAGGCTGACTAGGCATGGTGGCAAGAAGAGGAGGA
AGGTAGTCCATTACATCCATACTGAAGAAGTAGGAAAGAAAGTGGAAGAA
GATTGAGAGCCACAAAGCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCTCAATCCCCAT
CCCTGCTGCTCCAGTGATCCATGTTCTCCCACAAGGCTTCACCTCCTAAA
GGTCCCTCCATTTTCTTATGCAGCGCCACCAGCTGGCAAACAAGTGTTCA
AGCACGATCCCATGGGGAATCATTCATATTCACACTACAGCCCAGGAGCC
TCCCTCAACCAGCTGACTTCCCAGTTTCCAGCTTCTACAAAGACAGCCTC
TTGGACCAGTCACATACAAAATGTTATATGAACATATGCTTTCATGTCTC
TGGGACGCACGCGCAGGGGTGCTCCCCTACCCACCCACTCCCACTTCTTG
GGCCTGGTATTCCCCTGTACTGAGGCATATTAAGTTTGCAAGACCAAAGG
GCCTCTCTTCTCAATGATGGCCGACTAGGCCATC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAGTAAGTTCCTTGGGGGTTACTTATGAGAGAATC
AGGGATTACTCATAGGAGCAGAGGTGACTCCTGGACAGTTGCATCATCAC
AAAGTCCATCCCACCACAGATGACTCATGAGAGCTGCATCCTGAGAGTTC
ACTGCCCACCGTGCAGATAGCTCTGCCAAAGCCTTCTGCTCCCAGCAGCT
GTTTACTGACCCGATAACCTAGGCAGGAACCACGTGAATCTAGTGACTGA
GCTTCCAATGTCTCTAACATTCATGAGATATCTGAGTGTTGTGCTTCTGT
TAGCTCCTGTTAGCTTTCTGAGTCTATTAGTCTCTCTCACCCCTAAAGGA
AGGAATGTTTTAGTTTGGATGAAGTAGCTTGTTAATGCTTTTCCCTGCTC
CTCTACTGAGTGTCAAACCCAGGGCCATTTACATGTTAAGAATGGCTTCA
AGCACAACCCCTATTTTTCCTCTTTTGACATCTCTGTTTGTTTCTGTGGC
TTTATGTCTGCACGGCCTCCTTACCCTTTATCTTTATCTCAGGACTTCTA
AGCTTTGTCTTACCAAGTGCAGATGGCTTTCAGATATTGGGGTGAGCAAA
GGCAGTTCACTGCTGGCTAGCCATGGGATTTTTTTGGTTGGCTGAACTCT
GTGGGTGAGTGAAGAGAGTTGGTGCTGTGTGGAACAA

Query= MSMg01no538_k17.g1 MSMg01no538_k17.g1 CHROMAT_FILE:
MSMg01no538_k17.g1 PHD_FILE: MSMg01no538_k17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:22 2005
         (550 letters)



>mm_chr1_35036100_35037049
          Length = 950

 Score = 1060 bits (548), Expect = 0.0
 Identities = 548/548 (100%)
 Strand = Plus / Plus

                                                                       
Query: 3   taagttccttgggggttacttatgagagaatcagggattactcataggagcagaggtgac 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 taagttccttgggggttacttatgagagaatcagggattactcataggagcagaggtgac 262

                                                                       
Query: 63  tcctggacagttgcatcatcacaaagtccatcccaccacagatgactcatgagagctgca 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tcctggacagttgcatcatcacaaagtccatcccaccacagatgactcatgagagctgca 322

                                                                       
Query: 123 tcctgagagttcactgcccaccgtgcagatagctctgccaaagccttctgctcccagcag 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tcctgagagttcactgcccaccgtgcagatagctctgccaaagccttctgctcccagcag 382

                                                                       
Query: 183 ctgtttactgacccgataacctaggcaggaaccacgtgaatctagtgactgagcttccaa 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctgtttactgacccgataacctaggcaggaaccacgtgaatctagtgactgagcttccaa 442

                                                                       
Query: 243 tgtctctaacattcatgagatatctgagtgttgtgcttctgttagctcctgttagctttc 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgtctctaacattcatgagatatctgagtgttgtgcttctgttagctcctgttagctttc 502

                                                                       
Query: 303 tgagtctattagtctctctcacccctaaaggaaggaatgttttagtttggatgaagtagc 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tgagtctattagtctctctcacccctaaaggaaggaatgttttagtttggatgaagtagc 562

                                                                       
Query: 363 ttgttaatgcttttccctgctcctctactgagtgtcaaacccagggccatttacatgtta 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttgttaatgcttttccctgctcctctactgagtgtcaaacccagggccatttacatgtta 622

                                                                       
Query: 423 agaatggcttcaagcacaacccctatttttcctcttttgacatctctgtttgtttctgtg 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 agaatggcttcaagcacaacccctatttttcctcttttgacatctctgtttgtttctgtg 682

                                                                       
Query: 483 gctttatgtctgcacggcctccttaccctttatctttatctcaggacttctaagctttgt 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gctttatgtctgcacggcctccttaccctttatctttatctcaggacttctaagctttgt 742

                   
Query: 543 cttaccaa 550
           ||||||||
Sbjct: 743 cttaccaa 750


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space:   507600
Effective search space used:   507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)