ACCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCTGTCAAGTGACATTGAACGCCACGCCAGAAGTAGAACCAGTGC
AAGACAGAGAGAGAGAGAGAGAGGGAGGGAGAGAGAGAGAGAGAGAGGTA
TTGCAGTCAACAAAATTGGAGGGAGCCACACACGTGGTGGCGCATGCCTT
TAATCCCAGCATTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGGC
CAGCCTGGTCTACAGAGTGAGTTCCAGGACAGTCAGGGCTATACAGAGAA
ACCCTGTCTCAAAAACAAAAACAAAAACAAAAACAAAAAAACAAAACAAA
ACAAAAAAACCCCAAAAAACAAAATAAACAAACAAACAAACAAAAACCTG
GAGGGAGTGGGATATATGAAGAGTCATCTAAGCCCTTGAATGTCGGACAG
AGATAACAGAATCTGGGGTCTGTAGTATTGCTTTGGTCCAGCAGTTCCTT
AATATGGCTATTTCCTCCCATTTGGGATGGTAATGTATATTCCATGCCAC
TGTACTTGGAAGTATGTGATCTGGTTGGCCTATGTTGGCTGATTTTATAG
GGGATTATAAGAGATTGTATGAGTCTCAGAAGAGACTTTGAACTTTGGGT
TTTTAAACATTGTTGAGACTGTGATAGACTATGGGGGGCTTTTGAAGCTA
GACTAAATGCATTTTACATTATGACGAGGCTATAANCCTGTGGGTGCCAC
GGAGTGA

NCCCATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTGCCATCTTCTGGGGCAAGAAGAA
GAACCTTCAGACAATTTTTACTGATTTATAAAAACTGTTTATGAATAAGA
AAAAAAAGTGTTTACAAGCTGGTAGGATCACTCATTGGTTAAGAGCACTG
ACTGTTCTTCTGAGTTCAAATCCCAGCAACCATATGGTGGCTCACACTCA
TAAGTAATGAGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACA
GTGTACTTACATATAACAATAAATAAATCTTAAAACAAACAAAAAGTGTT
TACATTTTAAAGGTGAAATATTAATTTCTCACATATCGAGACATGCAAAG
GATTTGAAATTTGGAGACCTAAAAGGATGGAAGTTCATTTAATTGAAAAA
AAAGATATATATCAAATATCAAATAACATTTAAAAGCAATACTTACTGTA
ACTGATAATAATTATCCACTAATTCGTAATTTGTTGTCTGAAAAAATCTT
GTTATCTGAAAAGAAAATTGAAAAGTTTGTGTAGAGCAGAAAAGGTAGAA
ATTTGATCTCATATTAGTATCATATAGGTTTGTAGGTTCACTAGACCACT
GGCTCACAGTGCTCATTCCTACAAACTCACTGTATGCTTTGAGATATTTA
AATCTTGAGTAGAAAAAACAATATTCTGGAGGNTTATTCTCTCTTCCTCT
CTT

Query= MSMg01no540_m16.g1 MSMg01no540_m16.g1 CHROMAT_FILE:
MSMg01no540_m16.g1 PHD_FILE: MSMg01no540_m16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:11 2005
         (635 letters)



>mm_chr1_179811053_179812093
          Length = 1041

 Score = 1046 bits (541), Expect = 0.0
 Identities = 561/571 (98%), Gaps = 6/571 (1%)
 Strand = Plus / Minus

                                                                        
Query: 71   taagaaaaaaaagtgtttacaagctggtaggatcactcattggttaagagcactgactgt 130
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 taagaaaaaaaagtgtttacgagctggtaggatcactcattggttaagagcactgactgt 982

                                                                        
Query: 131  tcttctgagttcaaatcccagcaaccatatggtggctcacactcataagtaatgagatct 190
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 981  tcttctgagttcaaatcccagcaaccatatggtggctcacactcatcagtaatgagatct 922

                                                                        
Query: 191  gatgccctcttctggtgtgtctgaagacagctacagtgtacttacatataacaataaata 250
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921  gatgccctcttctggtgtgtctgaagacagctacagtgtacttacatataacaataaata 862

                                                                        
Query: 251  aatcttaaaacaaacaaaaagtgtttacattttaaaggtgaaatattaatttctcacata 310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861  aatcttaaaacaaacaaaaagtgtttacattttaaaggtgaaatattaatttctcacata 802

                                                                        
Query: 311  tcgagacatgcaaaggatttgaaatttggagacctaaaaggatggaagttcatttaattg 370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801  tcgagacatgcaaaggatttgaaatttggagacctaaaaggatggaagttcatttaattg 742

                                                                        
Query: 371  aaaaaaaagatatatatcaaatatcaaataacatttaaaagcaatacttactgtaactga 430
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741  aaaaaaaagatatatatcaaatatcaaataacatttaaaagcaatacttactgtaactga 682

                                                                        
Query: 431  taataattatccactaattcgtaatttgttgtctgaaaaaatcttgttatctgaaaagaa 490
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681  taataattatccactaattcgtaatttgttgtctgaaaaaatcttgttatctgaaaagaa 622

                                                                        
Query: 491  aattgaaaagtttgtgtagagcagaaaaggtagaaatttgatctcatattagtatcatat 550
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 621  aattgaaaagtttgtgtagagcagaaaaggcagaaatttgatctcatattagtattatat 562

                                                                        
Query: 551  aggtttgtag------gttcactagaccactggctcacagtgctcattcctacaaactca 604
            ||||||||||      ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561  aggtttgtagatcaaggttcactagaccactggctcacagtgctcattcctacaaactca 502

                                           
Query: 605  ctgtatgctttgagatatttaaatcttgagt 635
            |||||||||||||||||||||||||||||||
Sbjct: 501  ctgtatgctttgagatatttaaatcttgagt 471


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1041
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1031
Effective search space:   644375
Effective search space used:   644375
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)