CCCTTTCCTTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCCATAAGACATTATACACAAACATTTTAACATATATTGA
AAATACATGTATAAACATAATGTATGATATATTTCATCAATATAATATAT
TATATGTGATAGACATTGTTAATGTCTACATAAAACATTAAGGCCTGGAT
GCCATGTTAAGGCCTAGGTAAAGTGTTAAGGCCTAGCTAACTACTACCTG
GCTAGCCTGCCTTGATAAGGAAACTTTCTCATATGTTTCTGCTGTTACTA
GGAAACTTTCTAATACCAAGTTGATTATATATTTTGTTATGTGCTGTGCC
CTTGGAAACCAATCATGATAGAAGTCAGAAGAACTATTTTGTATAGTTAC
CCATAATAAGCTTGGATCCAAACCAACCACCCAGCAGCTCTTCCTGTGCC
TGTGGATAAGCACTGATGGTATTTGTCTTTATAAGCTGCCCCTGGAATGG
ACCCCAACGTAAGAGATATAAAAAAAGTATTTAAAATAAGACTTCCATTT
CGAGGAGTGGTCGAGAAAAGTTAAGTTCCCAAGACCTCCCTGGGAACGGA
CATCCTACTTGGCAGAAAGAGACATGTATGTGGGTAACTGACATCCTGGT
TGGCAAGTTAAGACATGAATGTTAGACAAAGCAAGTCCCCGACTCAGTTG
AATACCCCAACCAATAGGAACAGGATAAGTGTACAACATAGACGTGTTTC
TAGGAAATTGCTCATCTC

ATTTTTCTATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGGTGGGAGGAGAGAACT
GACTCCTGAAAGTTGTCCCCCGACTTCCACACAGGTGGTGTGGTGGTGGT
GGTGGTGGCGGCACACGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAG
GCAAAGGTCTGAGTTTGAGACCAGCCTGGTCTACAGAGCAAGTTCTAGGT
CAGCCAGGGCTACATGGAGAAATCCCATTTCTGGAAATAAAAAAATAAAA
AATAAATAAAACACAATAAAGGGTGGGCTGGGGATATAGCTCAGCAATAG
ATTGCTTGTCTAGCCTGTCCCAGAAACAAGTAGGAAAGACAGACATGGGG
GTTGAACTCTAGAATTGTGATTGTGGCTTCCATAGTCTCAGTAGGACCCC
TGCTTTCCCACGCTGTGACAGATGAACTTGGTTCTTCCCAAACCCTTCAT
GTGACTTCCTAGCAGAGGCAAGCTTTGAGATAGAGTCCAAACAGACCCAA
ACCTTCCACTAATATGCAGGTTGAGAAATGGGGTGCTCTCTCTCTCTGTG
TCTTCACTGAACATTGGTCAAACTCAAATGAGGTGAAAGACAGTTGACAT
CCCAACTTTGAATTTCTTCTCTTAAACTGAAGAGTATCAAGTGATTAAGC
TATGTAAAGAAAACTCCCTCTCCTGAACAGTCTTATGTTATCGAATTTAA
TGACAAACTTGGN

Query= MSMg01no541_j07.g1 MSMg01no541_j07.g1 CHROMAT_FILE:
MSMg01no541_j07.g1 PHD_FILE: MSMg01no541_j07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:17 2005
         (560 letters)



>mm_chr1_155742558_155743517
          Length = 960

 Score = 1083 bits (560), Expect = 0.0
 Identities = 560/560 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtgggaggagagaactgactcctgaaagttgtcccccgacttccacacaggtggtgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atggtgggaggagagaactgactcctgaaagttgtcccccgacttccacacaggtggtgt 260

                                                                       
Query: 61  ggtggtggtggtggtggcggcacacgcctttaatcccagcactcaggaggcagaggcagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtggtggtggtggtggcggcacacgcctttaatcccagcactcaggaggcagaggcagg 320

                                                                       
Query: 121 caaaggtctgagtttgagaccagcctggtctacagagcaagttctaggtcagccagggct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaaggtctgagtttgagaccagcctggtctacagagcaagttctaggtcagccagggct 380

                                                                       
Query: 181 acatggagaaatcccatttctggaaataaaaaaataaaaaataaataaaacacaataaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acatggagaaatcccatttctggaaataaaaaaataaaaaataaataaaacacaataaag 440

                                                                       
Query: 241 ggtgggctggggatatagctcagcaatagattgcttgtctagcctgtcccagaaacaagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtgggctggggatatagctcagcaatagattgcttgtctagcctgtcccagaaacaagt 500

                                                                       
Query: 301 aggaaagacagacatgggggttgaactctagaattgtgattgtggcttccatagtctcag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggaaagacagacatgggggttgaactctagaattgtgattgtggcttccatagtctcag 560

                                                                       
Query: 361 taggacccctgctttcccacgctgtgacagatgaacttggttcttcccaaacccttcatg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taggacccctgctttcccacgctgtgacagatgaacttggttcttcccaaacccttcatg 620

                                                                       
Query: 421 tgacttcctagcagaggcaagctttgagatagagtccaaacagacccaaaccttccacta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgacttcctagcagaggcaagctttgagatagagtccaaacagacccaaaccttccacta 680

                                                                       
Query: 481 atatgcaggttgagaaatggggtgctctctctctctgtgtcttcactgaacattggtcaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atatgcaggttgagaaatggggtgctctctctctctgtgtcttcactgaacattggtcaa 740

                               
Query: 541 actcaaatgaggtgaaagac 560
           ||||||||||||||||||||
Sbjct: 741 actcaaatgaggtgaaagac 760


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space:   522500
Effective search space used:   522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)