AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTCAACAGGGAGCAAAATGATACTGTATACAGTCAAATCAAATGAA
TATATACTATTGTTCCTCAAGGGAAAGTGGAAGTTCACCGATAGGGTTCT
TAACAGAAAGTCCTTATTAAGGCCTGTGTGTGATAGCACTACGTGAAGAA
GAACCTGCAAATACCAATACAGCGTGCAATGATCCTGGAATCTGACTGGG
TGAAGAGAATCAAGCTGACACTCACTGGCCTGGGGCTTTGCTGACTGCAG
GCTCCATGTGTTAACTATCACTACATTTTTCTTTTTTTTTTTTTAATGTG
AAATCAGACTTTTATTACATTCTGGTGTAAGACAACAAACTTTTTTTTAA
ATTAGGTATTTATTTCATTTACATTTCCAATGCTATCCCAAAAGTCCCCC
ACACGCTCCCCCACCTACTCCCCCACCCACCTACTCACATTAGCTCCTGA
CTGCCTTTCATGTTTCCTTATTTTTGAGGTTTGTTTGACTTACTGAGTCT
CACAATCTCCCAGGCTTACAGTTGGGAAGTAATTTCCTAACTTTCTCTAC
CATTCTGTTTTCTGTTCTTCTGTCTGCAATCATCCTCGTGTGCCGTAACT
TAATTTCTTTGGCTGGTATATGTGCTAATACTATTTTCCCAGCACACAGA
CTCTAAGAGCAAAGACTAGAAATGACTGTAAGAAGATAAGTGACTCACCT
TAAATTTCACAGCTCANGGCTGGTTG

CATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCTCCTTTACTGGGGCTGGGCCTGGGAATG
TTGTTCAGTGGCATTGTTCCTGCCTAGAATCTGCATCACTGTATACAGCT
GGATATGGTGGTCCCTGTCTGTGATCTTAGCACTCAGAAAGTGTAGGAAG
AAGGATCAGAAGTTCAAGGCTACCCTCTACTGCATAGTGAGTTCACAGTA
ACCCTGGGACACTTGAGACCCTATCACATAGCAGTAAACAAAAGCAGACA
TCCATCCCTCCAGTAGCTTTTGACTGACCATAGCTCCACAGCTAGGTGTG
ACTTTGTGAGCCCTTTCCCCATCTGTGCTGGGACTATGGCTGACTTGATC
CTGCACAGGCCCTGTGTATGCTGTTATAGTTCCTGTGTGCAGTGCCCCTC
TCCTGTCTGGAAAACTGTTTCACAGCAGCCTTTCACAACCTCTGGCTCGT
ACAATCTTTCTGTTCCTCTTCCATGATACTTCTTGAGCCTTGGTATCAGT
AAGGGTTAAACAGATGTCACATGAGGGCTGGGAATTCTACAATCTCTTAC
TGTCTATACTGTGCCCAAGGACTAAGTCTCTGTATTAATCCCTATTTACA
GAAAGGAGTTGAAGAGGAAAGAGTCTGGGGTAGATTTGGTCTAAACATAC
TATGCACATATATGCATTTAAGAAACCCTCAAACGATACAAAACACAACT
TTTCTTAAT

Query= MSMg01no542_c01.b1 MSMg01no542_c01.b1 CHROMAT_FILE:
MSMg01no542_c01.b1 PHD_FILE: MSMg01no542_c01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:03 2005
         (648 letters)



>mm_chr1_177084392_177085439
          Length = 1048

 Score = 1058 bits (547), Expect = 0.0
 Identities = 547/547 (100%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctcaacagggagcaaaatgatactgtatacagtcaaatcaaatgaatatatact 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gaattcctcaacagggagcaaaatgatactgtatacagtcaaatcaaatgaatatatact 488

                                                                       
Query: 65  attgttcctcaagggaaagtggaagttcaccgatagggttcttaacagaaagtccttatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 attgttcctcaagggaaagtggaagttcaccgatagggttcttaacagaaagtccttatt 428

                                                                       
Query: 125 aaggcctgtgtgtgatagcactacgtgaagaagaacctgcaaataccaatacagcgtgca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aaggcctgtgtgtgatagcactacgtgaagaagaacctgcaaataccaatacagcgtgca 368

                                                                       
Query: 185 atgatcctggaatctgactgggtgaagagaatcaagctgacactcactggcctggggctt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 atgatcctggaatctgactgggtgaagagaatcaagctgacactcactggcctggggctt 308

                                                                       
Query: 245 tgctgactgcaggctccatgtgttaactatcactacatttttctttttttttttttaatg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tgctgactgcaggctccatgtgttaactatcactacatttttctttttttttttttaatg 248

                                                                       
Query: 305 tgaaatcagacttttattacattctggtgtaagacaacaaacttttttttaaattaggta 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tgaaatcagacttttattacattctggtgtaagacaacaaacttttttttaaattaggta 188

                                                                       
Query: 365 tttatttcatttacatttccaatgctatcccaaaagtcccccacacgctcccccacctac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tttatttcatttacatttccaatgctatcccaaaagtcccccacacgctcccccacctac 128

                                                                       
Query: 425 tcccccacccacctactcacattagctcctgactgcctttcatgtttccttatttttgag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tcccccacccacctactcacattagctcctgactgcctttcatgtttccttatttttgag 68

                                                                       
Query: 485 gtttgtttgacttactgagtctcacaatctcccaggcttacagttgggaagtaatttcct 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67  gtttgtttgacttactgagtctcacaatctcccaggcttacagttgggaagtaatttcct 8

                  
Query: 545 aactttc 551
           |||||||
Sbjct: 7   aactttc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space:   662244
Effective search space used:   662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)