Query= MSMg01no543_a22.b1 MSMg01no543_a22.b1 CHROMAT_FILE:
MSMg01no543_a22.b1 PHD_FILE: MSMg01no543_a22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:18 2005
(606 letters)
>mm_chr1_97373036_97374041
Length = 1006
Score = 1149 bits (594), Expect = 0.0
Identities = 600/602 (99%)
Strand = Plus / Plus
Query: 5 gaattcttaattacagagagtgatctagaggacaaccatgctaattttaatcaccacagc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttaattacagagagtgatctagaggacaaccatgctaattttaatcaccacagc 264
Query: 65 aacaatgcatctaaaattgtcattcaagattgctaggacctagtaaagggaatgaatgtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aacaatgcatctaaaattgtcattcaagattgctaggacctagtaaagggaatgaatgtt 324
Query: 125 taaatctaattaaaaatggaacccatcaagatctcctaaggatatgggggttgaaatgaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taaatctaattaaaaatggaacccatcaagatctcctaaggatatgggggttgaaatgaa 384
Query: 185 tatcaaatatatgtttatatccatacaaattatatcttgtttcctttttattgggtatta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatcaaatatatgtttatatccatacaaattatatcttgtttcctttttattgggtatta 444
Query: 245 cttctctgaggaattattgcaagaaatagaataataaaaatgccaagggtggtaagtgca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cttctctgaggaattattgcaagaaatagaataataaaaatgccaagggtggtaagtgca 504
Query: 305 gaagtggatgctcacagtcatctattggatggagaacagggcccctaatgaaggagctgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaagtggatgctcacagtcatctattggatggagaacagggcccctaatgaaggagctgg 564
Query: 365 agaaagtacccaaggagctgaaggggtctgcaaccttataggaggaacaatggtgtgaac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agaaagtacccaaggagctgaaggggtctgcaaccttataggaggaacaatggtgtgaac 624
Query: 425 taaccagtaccccgagagctcatgtctctagctgcatatgtagcagaagatggcctagtc 484
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taaccagtaccctgagagctcatgtctctagctgcatatgtagcagaagatggcctagtc 684
Query: 485 agcagtcaatgggaggagagggacttggtcttgcaaggatcatatgccccagtataggag 544
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 685 agcagtcaatgggaggagagggacttggtcttgcaaagatcatatgccccagtataggag 744
Query: 545 aataccagaaccaggaagcaggagtgggtgggctggggagtagagcagggaagggtatag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aataccagaaccaggaagcaggagtgggtgggctggggagtagagcagggaagggtatag 804
Query: 605 gg 606
||
Sbjct: 805 gg 806
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no543_a22.g1 MSMg01no543_a22.g1 CHROMAT_FILE:
MSMg01no543_a22.g1 PHD_FILE: MSMg01no543_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:18 2005
(580 letters)
>mm_chr1_97565667_97566646
Length = 980
Score = 1048 bits (542), Expect = 0.0
Identities = 574/592 (96%), Gaps = 12/592 (2%)
Strand = Plus / Minus
Query: 1 catagcataattttgagagagagaagaaaacatgctacatggatgcagtg---------- 50
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 catagcataattttgagagagagaagaaaacatgctacatggatgcagtggtgtgtgtgt 783
Query: 51 --gtgtatgtgtgtgtgtaattttagcatctcaaaagactctgtgataagaaatagtaat 108
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 782 gtgtgtgtgtgtgtgtgtaattttaacatctcaaaagactctgtgataagaaatagtaat 723
Query: 109 agaacaataaaacgcttaggctgagacaagagtctacacaaaattaaaatgtgagcctta 168
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 722 agaacaataaaacgcttaggctgagacaagagtctacacacaattaaaatgtgagcctta 663
Query: 169 agaaattaaaatggttcttacaaacggaggtgtttctgaacagcacaattgaaaaagata 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 agaaattaaaatggttcttacaaacggaggtgtttctgaacagcacaattgaaaaagata 603
Query: 229 tatctcacaagacaatcttcaaattgagttttacaaattgaagattatttaactgatagt 288
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 602 tatctcacaagacaatcttcaagttgagttttacaaattgaagattatttaactgatagt 543
Query: 289 ctgtaagtggtagttaattgtaaaaggttcatgcttgcttacaaaccattacactgtatg 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ctgtaagtggtagttaattgtaaaaggttcatgcttgcttacaaaccattacactgtatg 483
Query: 349 caaaagaatagtattgccaattacccaagccagccgatattgaagaattgagaataatga 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 caaaagaatagtattgccaattacccaagccagccgatattgaagaattgagaataatga 423
Query: 409 tgatagatttcctggtctgggagaaatttcactcatttatgactctgcattctagctaaa 468
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgatagatttcctgatctgggagaaatttcactcatttatgactctgcattctagctaaa 363
Query: 469 gtcaaagtcttttgtgattagacatgtattatatttggttctatgtatggaaacataagc 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gtcaaagtcttttgtgattagacatgtattatatttggttctatgtatggaaacataagc 303
Query: 529 aaaggtcaatatataaaaacaaaaggtttttaaaggtgggcatttacctgag 580
||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 302 aaaggtcaatatataaaaacaaaaggtttttaaagttgggcatttacctgag 251
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
