CCAAAATCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTT
GATTTTCTGAAGTCCACCTTTTTGAGTTCTTTATATATGTTGGATATTAG
TCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTG
GTCTTTTTGTCTTATTGACGGCGTCTTTCGCCTTGCAGAAACTTTGGAGT
TTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGC
TGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCC
CCACTTTCTCCTCTATAAGGTTCAGTGTCTCTGGTTTTATGTGAAGTTCC
TTGATCTACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGAT
GCGCATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGA
AAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTTGAAGATC
AAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCA
TTGGTCTCCTGGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAA
TTGCTCTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCTACCAGAGGTT
CTTTTATCCTTGAGAAGACTTTTTGCTATCCTAGGTTTTTTGTTATTCCA
G

AAAACACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATAACAATAGGATATTA
TAGTAATACAGTAGAAGAGCTTGAAATAAAAATAAAAGAATTATGATTTC
ATGTGTTTAGTTCCATTTTTCAATTTTATCATTATTGATGGCTTTAATTT
CTTAAGTAAAATAAAGCAAAACCAACATTCTTCCACAATTCCAAATTTCA
TCAGAAAATGAGTGATACTATGTTACAAGTCTCCCACATTGTAAAATATG
CACACAAAACAAAAATAATATTTGAGTTTAGTAAGTGGTAGGAAAGTTAC
ATCTAGATAATGTGGACTACTATATCTGCAATGAAATTTCCACATTAATT
GTTCTTTATCGCATTTATTATTAACAATACATTTGTATTTAATGTGGCAT
TTTAAGATGCATACTGCTAGGTACTTGATGCTATAACCATGGCAAATGTT
CACAAATATTCAAATGGAACTCTAGATCTGGCTTATGTTACAAGTCAACT
TCTTCACCCTTAGTTGTAACTGGCTTGGATTCAAAACACCTCAGAGGTGG
TGTTATTTATTAGCCTTGAAACAAAATGTAACTATAACTACAGTGCATAT
TATTTACCAGGATTGTGGGTGTTTTAAGAGCCTTCATGAACAGCGCCCAC
CATTTCACTCTACCAGTCATTAGAACATAATCAAGTTGAAAGACTGGTCC
AGTTTAAAATCATCATT

Query= MSMg01no543_b05.g1 MSMg01no543_b05.g1 CHROMAT_FILE:
MSMg01no543_b05.g1 PHD_FILE: MSMg01no543_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:19 2005
         (658 letters)



>mm_chr1_19157698_19158755
          Length = 1058

 Score = 1272 bits (658), Expect = 0.0
 Identities = 658/658 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   cataacaataggatattatagtaatacagtagaagagcttgaaataaaaataaaagaatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cataacaataggatattatagtaatacagtagaagagcttgaaataaaaataaaagaatt 260

                                                                       
Query: 61  atgatttcatgtgtttagttccatttttcaattttatcattattgatggctttaatttct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgatttcatgtgtttagttccatttttcaattttatcattattgatggctttaatttct 320

                                                                       
Query: 121 taagtaaaataaagcaaaaccaacattcttccacaattccaaatttcatcagaaaatgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taagtaaaataaagcaaaaccaacattcttccacaattccaaatttcatcagaaaatgag 380

                                                                       
Query: 181 tgatactatgttacaagtctcccacattgtaaaatatgcacacaaaacaaaaataatatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgatactatgttacaagtctcccacattgtaaaatatgcacacaaaacaaaaataatatt 440

                                                                       
Query: 241 tgagtttagtaagtggtaggaaagttacatctagataatgtggactactatatctgcaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagtttagtaagtggtaggaaagttacatctagataatgtggactactatatctgcaat 500

                                                                       
Query: 301 gaaatttccacattaattgttctttatcgcatttattattaacaatacatttgtatttaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaatttccacattaattgttctttatcgcatttattattaacaatacatttgtatttaa 560

                                                                       
Query: 361 tgtggcattttaagatgcatactgctaggtacttgatgctataaccatggcaaatgttca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtggcattttaagatgcatactgctaggtacttgatgctataaccatggcaaatgttca 620

                                                                       
Query: 421 caaatattcaaatggaactctagatctggcttatgttacaagtcaacttcttcaccctta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaatattcaaatggaactctagatctggcttatgttacaagtcaacttcttcaccctta 680

                                                                       
Query: 481 gttgtaactggcttggattcaaaacacctcagaggtggtgttatttattagccttgaaac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gttgtaactggcttggattcaaaacacctcagaggtggtgttatttattagccttgaaac 740

                                                                       
Query: 541 aaaatgtaactataactacagtgcatattatttaccaggattgtgggtgttttaagagcc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaaatgtaactataactacagtgcatattatttaccaggattgtgggtgttttaagagcc 800

                                                                     
Query: 601 ttcatgaacagcgcccaccatttcactctaccagtcattagaacataatcaagttgaa 658
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttcatgaacagcgcccaccatttcactctaccagtcattagaacataatcaagttgaa 858


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space:   679104
Effective search space used:   679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)