GGCGAACTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCACTGGTAATCTTCTGAGTGTTTCTCTATACTGTTAATC
AGCTAAACGTAACCCTCAATTATAAATGCAAATTTCCAGGGTTAAATTGA
GTGTTCAGAGGCTCCAGAGTGGCTGTTATTGGCTGTACATTGCCAAGTCA
ACACAACGTAAAACAAAGTGTTGGGTCAATATTTATTTTTGAATTGGCGC
TCTATAGAGAGCTAATGTGGGGGGTAATTTGGGTCAATAAAAAAGAAATA
AGGGTCTCCCAAAGGCAATAAAAAGAGATTTGTTCTAAATTGTGTATTTT
TACATGAATTATCTGGATTATATCTACTGTTTAAGTCTGTGAAGGAGTGG
GGCTGGAAGTTTATTCAAATGCTGACATTTGCAGAGAAGACTCTCATGCT
GAGGGTCCAGACATTGGGAAAACAATTTTTCATATGTGACAAAAAGGAAA
AAAATCATGGAAATTTTAGATGATGTTTATATCTATTTATTGGGCCTGAT
TTCCTATGTGGAACCTAATTAATTATACATTTATTATTGAAATATATATG
GAAACACGGACAGGCTTAACCAAGCCCATTTTGTGTGTGTGTATGTCCGC
GTGTGTATGTGCCGCAACAGAGAGAGCACCTGCGTGTGACAGCATGCGAA
TGTGTGTGTGTGTGAGTGAGCGTTCGTGTGTGCGCGAATTTACTGC

NCCCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTCTTCAGCTTCTGATACTTC
CAAGTCCATACCCTAGTGATGAACTTCCTTCAACAATGCCACGTCAACTC
TCTCTTGAAAACCCACACCTCCTATTTGTCTTACTCCTTACGGGGTATTT
TATTCAAACCACCATAATAAGACAGATATGTTTTATGAGATTAAATACTT
ACCATTAAACACTAAGCATGTATCAAAACACCACAGTACATTAACATGAA
CAATTTTTATGGTGTGTATGCACCAGCTAAAATAGATTAAAGAAATAAAA
TCATTTTTGAAAATACATCATCAAAGGATACAGTAGAAGGCAATGGAATG
TATGTTTGGATTTACACAGGAGCCGTGCGAATAAAGGTGAATATGTTTCA
GCAATCAGGACAAGCACAGGTACTAATAAATGAATGTGAGGCAGAAGAAA
AAGCATCCCTGCATGAAATATCCCAAATTGGTAGCAAGAACCACTGCTCC
CACTACTCAGATAGCCACTTGCTAAGGTGATGAAGAGTGGGGATAAAGGG
GAAGAAGCTGAGACTCTAGAGTCAAGAGTGTTGTGTTAAAGTTTCATACT
GTCTGTAGTAAGATGCACTCATTACATATTAATGAAAAAGTAAGATTCAA
ACTCAGAGTGAAGAAAACATTTGCTGAGCTGGAAAGAGCTGTGA

Query= MSMg01no543_d05.g1 MSMg01no543_d05.g1 CHROMAT_FILE:
MSMg01no543_d05.g1 PHD_FILE: MSMg01no543_d05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:29 2005
         (650 letters)



>mm_chr1_42018192_42019241
          Length = 1050

 Score = 1218 bits (630), Expect = 0.0
 Identities = 645/650 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtcttcagcttctgatacttccaagtccataccctagtgatgaacttccttcaacaatg 60
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 988 tgtcttcagcttctgatacttcaaagtccataccctagtgatgaacttccttcaacaatg 929

                                                                       
Query: 61  ccacgtcaactctctcttgaaaacccacacctcctatttgtcttactccttacggggtat 120
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 ccacatcaactctctcttgaaaacccacacctcctatttgtcttactccttacggggtat 869

                                                                       
Query: 121 tttattcaaaccaccataataagacagatatgttttatgagattaaatacttaccattaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 tttattcaaaccaccataataagacagatatgttttatgagattaaatacttaccattaa 809

                                                                       
Query: 181 acactaagcatgtatcaaaacaccacagtacattaacatgaacaatttttatggtgtgta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 acactaagcatgtatcaaaacaccacagtacattaacatgaacaatttttatggtgtgta 749

                                                                       
Query: 241 tgcaccagctaaaatagattaaagaaataaaatcatttttgaaaatacatcatcaaagga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tgcaccagctaaaatagattaaagaaataaaatcatttttgaaaatacatcatcaaagga 689

                                                                       
Query: 301 tacagtagaaggcaatggaatgtatgtttggatttacacaggagccgtgcgaataaaggt 360
           |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 688 tacagtagaaggcaatagaatgtatgtttggatttacacaggagccttgcgaataaaggt 629

                                                                       
Query: 361 gaatatgtttcagcaatcaggacaagcacaggtactaataaatgaatgtgaggcagaaga 420
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gaatatgtttcagcaatcagaacaagcacaggtactaataaatgaatgtgaggcagaaga 569

                                                                       
Query: 421 aaaagcatccctgcatgaaatatcccaaattggtagcaagaaccactgctcccactactc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 aaaagcatccctgcatgaaatatcccaaattggtagcaagaaccactgctcccactactc 509

                                                                       
Query: 481 agatagccacttgctaaggtgatgaagagtggggataaaggggaagaagctgagactcta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 agatagccacttgctaaggtgatgaagagtggggataaaggggaagaagctgagactcta 449

                                                                       
Query: 541 gagtcaagagtgttgtgttaaagtttcatactgtctgtagtaagatgcactcattacata 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gagtcaagagtgttgtgttaaagtttcatactgtctgtagtaagatgcactcattacata 389

                                                             
Query: 601 ttaatgaaaaagtaagattcaaactcagagtgaagaaaacatttgctgag 650
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ttaatgaaaaagtaagattcaaactcagagtgaagaaaacatttgctgag 339


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space:   665600
Effective search space used:   665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)