TTCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCACCTGAGGAATACCGAATGGCTAAGAAGCACCTGAAAAAAT
ATTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACTCTGAGA
TTCTACCTCACATCACTCAGAATGGCTAAGATCAAAAATTCAGGTGACAG
CAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGT
GGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCAGTTCCTC
AGAAAATTGGACATGGTACTACCAGAGGATCCTGCAATACCTCTCCTGGG
CTTATATCCAGAAGATGTTCCAACTAGTAAGAAAGAAACATGCTCCACTA
TGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGA
TGCCCCTCAACAGAAGAATGGATACAGAAAATATGGTACATTAACACAAT
GGAGTTCTACTTAGATATTAAAAAGAATGAATTTATGAAATTCCTAGGCA
AATGGATGGACCTGGAGGACATCATTCTGAGTGAGGTAACCCAATCACAA
AGGAACTCGCATAATATGTACTCACTGATAAGTGTATATTAGCCCAGAAA
CTTAGAATACCCAAGATATAAGATACAATTTGCTAAACGCTTGAAACTCA
AGAAGAACGAAGACCAAAGTGTGAACACTTTTGCCCCTTCTTAGAATTGG
AACAAACN

CCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCTGTTATGTACCTACAA
TAATTCATTTGTAGTGTTATTATGAGAATGAACTAGATAACACACATATG
TCTATATAACCCTAGAAAATAATTAATAGTTAATAGAGATGCTTAATGCT
ATAACTGTAATGCTCAATAATATATCCCAAATTATATTCTCTGGATATCT
GTATATCTTTTATTATTGTTATTGGGTATTTTTCTAGTCCCTGAAGGGAA
AGAACTGATAGAGAGAAAATACTTCCTACTATATTGTGACTATTATAATT
ACAAACTTCAGCAAAGCTCCATTAGTTTGGAAAATATGAATATAAACATA
CTTAAAGAGTGTTACTACAGTCTGGGAAGTGGAGTATAAAAAACAGCAAG
GTCAGTAGTAAAGAATATAAGCTAAGGGGAAGACAGAAAGCTCTGAGTTA
GAAGGAATCAAAGTGCAAGAATGTCTGCCCATGCTGTCTCACTTTAAACA
ACACTGCATATTGACAAAACAAAAGCAGTAAGCTATGGCCTAGGGCTGCC
TACTGGAGCTTAGAATTTGTTATAAACATATAATAGTTAAATCTGGTATT
TCTTCCATGTATAATGTCTTTAAATAAATCAAACACTTTTGATACACTCA
GCATGGTCTAAGGAGCAAGGAAACAAAAATATATGATCTCTGCCTTAAAG
TACCTTGGACTGAC

Query= MSMg01no543_h11.g1 MSMg01no543_h11.g1 CHROMAT_FILE:
MSMg01no543_h11.g1 PHD_FILE: MSMg01no543_h11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:51 2005
         (667 letters)



>mm_chr1_110096340_110097409
          Length = 1070

 Score = 1257 bits (650), Expect = 0.0
 Identities = 664/670 (99%), Gaps = 3/670 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atctgttatgtacctacaataattcatttgtagtgttattatgagaatgaactagataac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 atctgttatgtacctacaataattcatttgtagtgttattatgagaatgaactagataac 811

                                                                       
Query: 61  acac---atatgtctatataaccctagaaaataattaatagttaatagagatgcttaatg 117
           ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 acacataatatgtctatataaccctagaaaataattaatagttaatagagatgcttaatg 751

                                                                       
Query: 118 ctataactgtaatgctcaataatatatcccaaattatattctctggatatctgtatatct 177
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ctataactgtaatgctcaataatatatcccaaattatattctctggatatctgtatatct 691

                                                                       
Query: 178 tttattattgttattgggtatttttctagtccctgaagggaaagaactgatagagagaaa 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tttattattgttattgggtatttttctagtccctgaagggaaagaactgatagagagaaa 631

                                                                       
Query: 238 atacttcctactatattgtgactattataattacaaacttcagcaaagctccattagttt 297
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 atacttcctaccatattgtgactattataattacaaacttcagcaaagctccattagttt 571

                                                                       
Query: 298 ggaaaatatgaatataaacatacttaaagagtgttactacagtctgggaagtggagtata 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ggaaaatatgaatataaacatacttaaagagtgttactacagtctgggaagtggagtata 511

                                                                       
Query: 358 aaaaacagcaaggtcagtagtaaagaatataagctaaggggaagacagaaagctctgagt 417
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 510 aaaaacagcaaggtcagtagtaaagaatataagctaaggggaagacagaacgctctgagt 451

                                                                       
Query: 418 tagaaggaatcaaagtgcaagaatgtctgcccatgctgtctcactttaaacaacactgca 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tagaaggaatcaaagtgcaagaatgtctgcccatgctgtctcactttaaacaacactgca 391

                                                                       
Query: 478 tattgacaaaacaaaagcagtaagctatggcctagggctgcctactggagcttagaattt 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tattgacaaaacaaaagcagtaagctatggcctagggctgcctactggagcttagaattt 331

                                                                       
Query: 538 gttataaacatataatagttaaatctggtatttcttccatgtataatgtctttaaataaa 597
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 330 gttataaacatataatagttaaatctggtatttcttccatgtataatatctttaaataaa 271

                                                                       
Query: 598 tcaaacacttttgatacactcagcatggtctaaggagcaaggaaacaaaaatatatgatc 657
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tcaaacacttttgatacactcagcatggtctaaggagcaaggaaacaaaaatatatgatc 211

                     
Query: 658 tctgccttaa 667
           ||||||||||
Sbjct: 210 tctgccttaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1070
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1060
Effective search space:   696420
Effective search space used:   696420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)