TCTGCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XGCGCGGTAATTCTGATCTTTCCAAAACTTTTATCATGAATGGTTGTCGG
ATCTTGTCAAATGCTTTTTCTGCATCTAACGAGATGATCATATGGTTTTT
GTCTTTGAGTTTGTTTATATCACGGATTACATTGATGGATTTTCGTATAT
TAAACCATCCCTGCATCCCTGTAATGAAATCCACTTGGTCAGGATGGATG
ATTGCTTTAATGTGTTCTTGGATACGGTCAGCGAGAATTTCATCGAGGAT
TTTTGCATCTATATTCATTATAGAAATTGGTCCGAACTTCTCTATCTTTG
CTGGTCCTTTCCGCGTCTTACGCATCATAGTAATAGTGGCTTCATAAAAT
GAGTCTGGGTAGAGTACCTCCTACTTCTATTCTGTGAAATATTCTGTGCA
GAACTGGAATTAGATCTTCTTTGAAGGTTTGAGAGAACTCTGCACTAAAC
CCATCTGGCCCTGGTCTTTTTTTGCCTGGCAGACTATTAACACCTGCCCT
CTATCTCTTTACGCGATCATGGGACTGTTTAGATGATCAACTTGATCCTG
ATTTCACTTTGGTATCTGGTATCTGTCCCAAAATTTGGCCACATCTTTCA
GGTTTCCCCAGTTTTGTTTGATAACATCCCTTTTGTCCAATGAATCCGCA
TGTTGTTTTGGATCCCCCTCCATAATTCGTCGTTTTTCCTCCCCC

NCTTTTACGATTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCCTTGAGAAGTATCA
AAACAAATACTTTTTCTCCAGAAAGGGTCCAGGGAATGCCTTCTTCCATA
TTTACTACACTTCACGAGGCTTAGGGGGCTTAGGAGGCTAGGGCATATGT
CAGAAGGGTGACATATCCTTGCAAGAGGCTACTAAAGGATAATGTATGGA
GATGAGAGAGAAAATGAAGTGGTGATAAAGACTTAGAAAGAAAGACTCTC
TGTGGCCAGGGGGCATGAGAATGACAACCAGCATGAGCACTGGGAAGGGC
TTAACTTTGGGTATGTCTTTGGAACTTATATTATCCCATGGTGGGCTAAG
GATGCTAGACAAGGCTTGGTATTTACCCCACAAGGTTTTGATCTTACTTT
GGTCAATACTTCTTTTTTCTTTCACCCTTTTTAATGATAGAAAAATATAT
TGTGCCTACTTTTGTATTCTGTATGAAATATGTATTTTCATTTTGATTTT
TCAGGGCTCACAACTAAGAGTTTACCAATAGTCTCTCAAGAAATTTTGTC
TTTGGAGCTTTTTGTGCGATGCTGGAAGTGTTAGGCTCTTGGAGAAGGAC
TGAGGATATAGTTTGTATGATGAGTACAACATGAGTTTGGGGATACTAAG
AAGGCTAATTTTGACTGTCAATTTGATTGGGTTAATAAAC

Query= MSMg01no543_k05.g1 MSMg01no543_k05.g1 CHROMAT_FILE:
MSMg01no543_k05.g1 PHD_FILE: MSMg01no543_k05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:04 2005
         (592 letters)



>mm_chr1_131821518_131822509
          Length = 992

 Score =  903 bits (467), Expect = 0.0
 Identities = 479/483 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcccttgagaagtatcaaaacaaatactttttctccagaaagggtccagggaatgccttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tcccttgagaagtatcaaaacaaatactttttctccagaaagggtccagggaatgccttc 424

                                                                       
Query: 61  ttccatatttactacacttcacgaggcttagggggcttaggaggctagggcatatgtcag 120
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ttccatatttactacacttcaggaggcttagggggcttaggaggctagggcatatgtcag 364

                                                                       
Query: 121 aagggtgacatatccttgcaagaggctactaaaggataatgtatggagatgagagagaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aagggtgacatatccttgcaagaggctactaaaggataatgtatggagatgagagagaaa 304

                                                                       
Query: 181 atgaagtggtgataaagacttagaaagaaagactctctgtggccagggggcatgagaatg 240
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ctgaagtggtgataaagacttagaaagaaagactctctgtggccagggggcatgagaatg 244

                                                                       
Query: 241 acaaccagcatgagcactgggaagggcttaactttgggtatgtctttggaacttatatta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 243 acaaccagcatgagcactgggaagggcttaactttgggtatgtctttggaactcatatta 184

                                                                       
Query: 301 tcccatggtgggctaaggatgctagacaaggcttggtatttaccccacaaggttttgatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tcccatggtgggctaaggatgctagacaaggcttggtatttaccccacaaggttttgatc 124

                                                                       
Query: 361 ttactttggtcaatacttcttttttctttcaccctttttaatgatagaaaaatatattgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ttactttggtcaatacttcttttttctttcaccctttttaatgatagaaaaatatattgt 64

                                                                       
Query: 421 gcctacttttgtattctgtatgaaatatgtattttcattttgatttttcagggctcacaa 480
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 63  gcctacttttgtattctgtatgaaatacgtattttcattttgatttttcagggctcacaa 4

              
Query: 481 cta 483
           |||
Sbjct: 3   cta 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space:   571524
Effective search space used:   571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)