TCTCTCTCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTCCAAGGTTTCTACAAGGGTGACACTAGGTAACTCCT
AGTAATGTAGGATATAGAGCCTGAACAGGCCATCTTCTGAAAGCAGGCAA
AACCTCAAGTGGAAGTATTGGTAAACCAATCCATCCACAAAACCTCCAAT
CTTGTTGTGCTTGCATGATATGCTGGGACTTGAACCTAGAATAATTGACT
TGAACCTAGAATAATTGCCATCGAGAACACCAGCAATGGATGGGAACAGA
TGTAGAGCCTCACAGCAAAATTAAGTGGAGCTTGGGGAGTTCTATATAGG
ACAGGGAGAAAGGATTGGAAGAGACAGAGCAATTGAGGATACCAGAAGAA
TACAAAACATAAAAAGCAATACAGACTGGGACTCACGTGAGTTCACAGAG
ATCAAACAGCCTGTGGGTCCGACCTAGTATGGGTCTGACTTACTTCCTCT
GCATTTGTGCAGAGGTTGTATAGTTTGGTGTTCTTTTGGGATTCCTAAAA
GTGGGAGCAGGTGATTATTCTAACTCTTTTGTCTGCTTTGGGAGTTTTTT
TCCATTTACTGGATTGTCTCATCCATTCTATATGTAAGAATATGTACCTG
ATCTTATTATAGCTTGTTATGTTGTAATTGGAGGGAAGGGCGAGGAAACT
GCATTTGGAATGCAATTATATGAGAGAAGAATAAGT

ATGGCCCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTCTTGCACCTGCGCACA
ATGCTTGTTTACTAGTTAGGCACAGCAGGAGCCAGCACCATCTTATAATG
GCAATTACTTATGGCTCTCCACACACTGGATTTCTACATTCATTTACATA
TAACATATGCATATTTATAGTAGCCTACTTTAATTAAAATTTTGATTTTT
CAATCTTTGAGAGAGGAAAAAGTCTTAATATTAGTTTCTCTGGATATTAT
AAAAATAAACAGATATACAACAGATTAACTAATGGAAGTATATAGATAAT
CTCAGCTTTTCCATTACTTTTGCAGGTGTCAAAAATAATCAAAAAAAGAC
AAATTATGGTTTTATTAGATACAAGATTTAATTGAGTAGTTTTTTTTAAA
TGTGCCTATAGAGATAAGGATTAATTTAACAGGATTTGTTTCTTGAGTTT
CTCTAGTACTTAATACCCATCTTGGTGCCCTTTGGATTTGTACCTGCAAC
TAGAACAGGCCTAGGACTCTGGCTCCCCATCTGCTCTGACAACATGCAGA
GGAAGCTTGATTCCCATGAGCTCTGACACACCCAGGATCACAGGTGATGC
CACAACATCTGCTCCAATATCCAGCATAACTGGGAACCCTGGGACCCAGA
CAACACAGAAACCCACACTGAGCCAGAGGCACACAT

Query= MSMg01no544_g13.g1 MSMg01no544_g13.g1 CHROMAT_FILE:
MSMg01no544_g13.g1 PHD_FILE: MSMg01no544_g13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:04 2005
         (655 letters)



>mm_chr1_49901516_49902572
          Length = 1057

 Score = 1228 bits (635), Expect = 0.0
 Identities = 651/657 (99%), Gaps = 2/657 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   actcttgcacctgcgcacaatgcttgtttactagttaggcacagcaggagccagcaccat 60
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actcttgcacctgcacacaatgcttgtttactagttaggcacagcaggagccagcaccat 260

                                                                       
Query: 61  cttataatggcaattacttatggctctccacacactggatttctacattcatttacatat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttataatggcaattacttatggctctccacacactggatttctacattcatttacatat 320

                                                                       
Query: 121 aacatatgcatatttatagtagcctactttaattaaaattttgatttttcaatctttgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacatatgcatatttatagtagcctactttaattaaaattttgatttttcaatctttgag 380

                                                                       
Query: 181 agaggaaaaagtcttaatattagtttctctggatattataaaaataaacagatatacaac 240
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 agaggaaaaagtcttaatattagtttctctagatattataaaaataaacagatatacaac 440

                                                                       
Query: 241 agattaactaatggaagtatatagataatctcagcttttccattacttttgcaggtgtca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agattaactaatggaagtatatagataatctcagcttttccattacttttgcaggtgtca 500

                                                                       
Query: 301 aaaataatcaaaaaaagacaaattatggttttattagatacaagatttaattgagtagtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaataatcaaaaaaagacaaattatggttttattagatacaagatttaattgagtagtt 560

                                                                       
Query: 361 tttttt--aaatgtgcctatagagataaggattaatttaacaggatttgtttcttgagtt 418
           ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttttttaaatgtgcctatagagataaggattaatttaacaggatttgtttcttgagtt 620

                                                                       
Query: 419 tctctagtacttaatacccatcttggtgccctttggatttgtacctgcaactagaacagg 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 tctctagtacttaatacccatcttggtgccctttggatttgtacctgcaaccagaacagg 680

                                                                       
Query: 479 cctaggactctggctccccatctgctctgacaacatgcagaggaagcttgattcccatga 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cctaggactctggctccccatctgctctgacaacatgcagaggaagcttgattcccatga 740

                                                                       
Query: 539 gctctgacacacccaggatcacaggtgatgccacaacatctgctccaatatccagcataa 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gctctgacacacccaggatcacaggtgatgccacaacatctgctccaatatccagcataa 800

                                                                    
Query: 599 ctgggaaccctgggacccagacaacacagaaacccacactgagccagaggcacacat 655
           |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 801 ctgggaaccctgggacccagacaacacaaaaacccacactgagccagaggcacacat 857


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1057
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1047
Effective search space:   675315
Effective search space used:   675315
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)