XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTACA
GGAGCTCAATGTCCAGGCACGTTGTAAGGACACTTTACCACAATTAGGGC
ATAAGGGGGCTGCTGAGGGGCCACTCTGGCAGACTCAGTGGTGCCCTGAG
GAGACTGAGCCGCAGCACCAGAGGAAGCCAAATTCAGAGAGAGGGTTCTC
TCACACAGGAGGATAAGTGCTTTTGATCTGGACCAGCAAACAAGACAGTT
AACTATGAAAAAAGAGGTCACAATGAAAATGGGCACAGGTTGCCAAAACC
TGTTTTCTACCAACAAACCTTCCTTCAAAGTCCTTCTAGAAACGGAATCA
TCTTAATGTTTTCAACTTACGTACATGCATGCAACTGTGTATGGTTTGGT
ACAGGTTCCCATGGAAGTCAGAAACTGACAGGTCATTGATTCTGGGAACT
GAACTCTGGTCCAATGCAAGAACAGTGAGCTATTTCTCCAGCTCCATACA
GAAATTTCTTAAGAGGTTCTACTGCTAGGAAAACAAACAAACAAAAACAA
ACAAACAAACAAACAAAAAAACAAGGATATTACTCCAGGAACAGAGAATA
AATCAATCCGATGTAAATCATATCACCACCACCACCACCACCACCATCAT
CATCATCATTGTCATCATCACCCATTTGTGGGTGAATTGAGATCTTCTCT
GGTTTGGGTTCCCTTTNAATCTGCCTCCTGTGCCTGAGATTCGG

GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXAATGCTTTGGGCATGGTATGTGTTCTACCACTGAAC
TATATCCATAGCTGTTGCAGATCGGTCTTGCATTCTGTACATTCAGATAG
TGATTTTTGTGCCCAGACATCTGATTACAGTCTGGGTGATGGCATGGCCA
AGCATCTCTGGTCTCCATGATATGTAAAAGTTGTTTTCAGGTATCTCTGG
TTGATTAGTAAAGAACTGATCAGTCTATGACTGGGCAGGAGAGGACAATG
GAGGTGGGACATCGGATCCCTGTGAGAGGATCCCAGGTACAGAGAGAACA
GCAGAAAGAGTCGAAAGGTGTGGAGAGGCCATGTAGAGACACCAGGAGGG
TTTGTCATGGGGACACACATGCAGCAGAGTCCACCAGAGCAAGATTTAGA
TGTCAAGTAATGGGGCATTTATCTGGGCATTAACAGCCTAGTTGGGTTAG
AATAGTTCAGAATCTGCCCAGCAGAGTGCCAGCAGCTAGTTAATAAAAAT
ACTAGGTCTTTGTGTCTTTTATTCAGGAGCTATATGGGCTAAAGTGGGTA
TAGAGAACCCTGCAGGAATTTGCAGGCAAAGGGGGTATAGCAACCCCCCT
CTCCAACACTCCTATACCTAGTCTTTTAGATTCTTGGTGTGTGTGCANGT
GTGTGAGGTAACACGTCAACCTGCAGTGTCAT

Query= MSMg01no545_k22.b1 MSMg01no545_k22.b1 CHROMAT_FILE:
MSMg01no545_k22.b1 PHD_FILE: MSMg01no545_k22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:43 2005
         (665 letters)



>mm_chr1_92079464_92080528
          Length = 1065

 Score = 1125 bits (582), Expect = 0.0
 Identities = 642/664 (96%), Gaps = 5/664 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctacaggagctcaatgtccaggcacgttgtaaggacactttaccacaattaggg 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 gaattcctacaggagttcaatgtccaggcacgttgtaaggacactttaccacaattaggg 636

                                                                       
Query: 65  cataagggggctgctgaggggccactctggcagactcagtggtgccctgaggagactgag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 cataagggggctgctgaggggccactctggcagactcagtggtgccctgaggagactgag 576

                                                                       
Query: 125 ccgcagcaccagaggaagccaaattcagagagagggttctctcacacaggaggataagtg 184
           | ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 575 ctgcagcaccagaggaagccaaattcagagagagggttctctcacacaggaagacaagtg 516

                                                                       
Query: 185 cttttgatctggaccagcaaacaagacagttaactatgaaaaaagaggtcacaatgaaaa 244
           ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 515 cttttgatctggaccagcaaacaaggccgttaactatgaaaaaagaggtcacaatgaaaa 456

                                                                       
Query: 245 tgggcacaggttgccaaaacctgttttctaccaacaaaccttccttcaaagtccttctag 304
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 455 tgggcacaggttgccaaaacctgttttctaccaacaaacctttcttcaaagtccttctag 396

                                                                       
Query: 305 aaacggaatcatcttaatgttttcaacttacgtacatgcatgcaactgtgtatggtttgg 364
           |||| |||||||||||||||||||||| || |||||||||||| ||||||| ||| ||||
Sbjct: 395 aaactgaatcatcttaatgttttcaacatatgtacatgcatgcgactgtgtttgggttgg 336

                                                                       
Query: 365 tacaggttcccatggaagtcagaaactgacaggtcattgattctgggaactgaactctgg 424
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgcaggttcccatggaagtcagaaactgacaggtcattgattctgggaactgaactctgg 276

                                                                       
Query: 425 tccaatgcaagaacagtgagctatttctccagctccatacagaaatttcttaagaggttc 484
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 275 tccaatgcaagaacagtgagctatttctccagctccacacagaaatttcttaagaggttc 216

                                                                       
Query: 485 tactgctaggaaaacaaacaaacaaaaacaaacaaacaaacaaacaaaaaaacaaggata 544
           |||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||| |
Sbjct: 215 tactgctaggaaaacaaacaaac--aaacaaacaaacaaaaaaacaaaaaaacaaggaca 158

                                                                       
Query: 545 ttactccaggaacagagaataaatcaatccgatgtaaatcatatcaccaccaccaccacc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ttactccaggaacagagaataaatcaatccgatgtaaatcatatcaccaccaccaccacc 98

                                                                       
Query: 605 accac---catcatcatcatcattgtcatcatcacccatttgtgggtgaattgagatctt 661
           |||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  accaccatcatcatcatcatcattgtcatcatcacccatttgtgggtgaattgagatctt 38

               
Query: 662 ctct 665
           ||||
Sbjct: 37  ctct 34


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space:   691025
Effective search space used:   691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)