XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACCT
CAGATTCTCAGGCACCACAGACACCACTGGATGCCTCCGAATTGCCGAGA
AAGGCTTGGGGAACCTGTTGGCTGGCTCTAGCCTGGGGCTGAAGGGAAAA
GGGCAGGAGAGCACTCCAGCTGTGTCCCATGGGTTGGAGAGTCCTTGGTT
TTCTAGGCAGGTGTGGCTGGCAGCTTGACTTGGTGTTCATGCCTGAGAAC
ACAGAAAGGATTTCTGTCAGAGATTAGGCACATGGATCTTTAGAGGAAGA
CATGCTTCATTGCTCAAGCACCAGGGATTCAGATGAGAAGAGGCAGTCCA
TGTTTTTAAGGTGTTTATTGTTGCACAGAGGAGTGTCTGTGAAAGGGAGC
TAAGAGGGTAGTAAAGGCAGAGAAAGCCAGAGAGAGTGAAAGAGTAGAGA
ATTAGAGGCTGGCCATGGCTACATGGAAAGTTTGGTAAAGGGAATGATGA
GAGAGGGAGAGCAAAAGGGCAGGAGAGAGAGGCAAGAGTAAGAGAGTAAG
AGTAAGAGAGGAAGGAGGGATCAAGCAGCCCCTTTTATAGTGGTCCAGGA
TTACCTGGCTGTTGCAGGCGACCGTGGGGGTGGAGTACAGAAAGAATACC
AGAGGATTGGGGCTATACCCTATGTGACTGATGCCCACAGAATTATTGAT
CTGAGGCCTCATGTCAGGAGCTTGATATCTGGGCAAATGGCAAAT

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTGAAAATTAGCACTGTGTATTTTTCTAATAAAT
AAGATTAGATGAAGTAATTGATAGTCTTAGAGAAAATCTTTATTAACTGT
ATTTCCTAAAACAAGGGAAAGTTTTAAAGCACCAAAATTTCTGGTACTTG
GAACCATTTCTTTCTTTCCAATACAAAAATGTTTAAAAAGATCTTCTAAG
AGGGCAATGTTCCTTCATAGACCTTAACTCAAAGTGTCAAATTCATATTA
TAAGGATATTAAATATTCAGGGATTTGCATCTGATCAAAGACTTCTTCAC
TAGATTTAAAACTATCAGATATTTTAAAGCACTGAAAAGGTAAATGAATT
GATATTCTAAATGCAGCAATGAATCTAAAATGAAAAAAAATGCTGTGGAT
TTTTTTTCTTGAAGTTTAAAACCTGTTTATAAATGAAAGAATATCAGACA
TATACAAGGAGAATAAAACCAAACTCCTATACATTATCAGTATATGCAAA
AATATAATAAAATGCTCACTAATGCATGAGGGTTGAAGTGACCATCCATT
TTGAAGGCAAGTAGTTGATCCTGATGCTTATCCAGTATTTGTTATATGTC
CCTATTTACAACTATACTGTGCTTTTCTATTTAGAGCATATATAANATTA
GATTCAGAAAAAAACAAAAACAAAACCAAAAACCATGTTCA

Query= MSMg01no545_l10.g1 MSMg01no545_l10.g1 CHROMAT_FILE:
MSMg01no545_l10.g1 PHD_FILE: MSMg01no545_l10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:46 2005
         (675 letters)



>mm_chr1_141504111_141505188
          Length = 1078

 Score = 1181 bits (611), Expect = 0.0
 Identities = 653/668 (97%), Gaps = 3/668 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgaaaattagcactgtgtatttttctaataaataagattagatgaagtaattgatagtc 60
           |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 ttgaaaattagcactgagtatttttctaataagtaagattagatgaagtaattgatagtc 260

                                                                       
Query: 61  ttagagaaaatctttattaactgtatttcctaaaacaagggaaagttttaaagcaccaaa 120
           |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 261 ttagagaaaatctttattaactgtatttcctaaaacaagggaaaattttaaaacaccaaa 320

                                                                       
Query: 121 atttctggtacttggaaccatttctttctttccaatacaaaaatgtttaaaaagatcttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttctggtacttggaaccatttctttctttccaatacaaaaatgtttaaaaagatcttc 380

                                                                       
Query: 181 taagagggcaatgttccttcatagaccttaactcaaagtgtcaaattcatattataagga 240
           ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 381 taagagggcaatgttcctttatggaccttaactcaaagtgtcaaattcatattataagga 440

                                                                       
Query: 241 tattaaatattcagggatttgcatctgatcaaagacttcttcactagatttaaaactatc 300
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattacatattcagggatttgcatctgatcaaagacttcttcactagatttaaaactatc 500

                                                                       
Query: 301 agatattttaaagcactgaaaaggtaaatgaattgatattctaaatgcagcaatgaatct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agatattttaaagcactgaaaaggtaaatgaattgatattctaaatgcagcaatgaatct 560

                                                                       
Query: 361 aaaatgaaaaaaaatgctgtggattttttttcttgaagtttaaaacctgtttataaatga 420
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaaatgaaaaaaattgctgtggattttttttcttgaagtttaaaacctgtttataaatga 620

                                                                       
Query: 421 aagaatatcagacatatacaaggagaataaaaccaaactcctatacattatcagtata-- 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 621 aagaatatcagacatatacaaggagaataaaaccaaactcctatacattatcagtataac 680

                                                                       
Query: 479 tgcaaaaa-tataataaaatgctcactaatgcatgagggttgaagtgaccatccattttg 537
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgcaaaaaatataataaaatgctcactaatgcatgagggttgaagtgaccatccattttg 740

                                                                       
Query: 538 aaggcaagtagttgatcctgatgcttatccagtatttgttatatgtccctatttacaact 597
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 741 aaggcaagtagttgatcctgatgcttatccagtatttgttatatatccctatttacagct 800

                                                                       
Query: 598 atactgtgcttttctatttagagcatatataanattagattcagaaaaaaacaaaaacaa 657
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 801 atactgtgcttttctatttagagcatatataaaattagattcagaaaaaaacaaaaacaa 860

                   
Query: 658 aaccaaaa 665
           || |||||
Sbjct: 861 aaacaaaa 868


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1078
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1068
Effective search space:   710220
Effective search space used:   710220
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)