Query= MSMg01no548_o18.b1 MSMg01no548_o18.b1 CHROMAT_FILE:
MSMg01no548_o18.b1 PHD_FILE: MSMg01no548_o18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:59 2005
(373 letters)
>mm_chr1_91181667_91182439
Length = 773
Score = 677 bits (350), Expect = 0.0
Identities = 365/370 (98%)
Strand = Plus / Plus
Query: 4 ggaattctaagggccccaggaactctttatgattgtttattcaaacttctgggtatttac 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctaagggccccaggaactctttatgattgtttattcaaacttctgggtatttaa 263
Query: 64 attttaattataccaaatgaacaggcaagaatacaagaacacaagccctgttttaatttg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 attttaattataccaaatgaacaggcaagaatacaagaacacaagccctgttttaatttg 323
Query: 124 ttgttgtttgatggcactagggaaggaacccagggtctctcacctgctagggagtgctct 183
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 324 ttgttgtttgatggcactagggaaggaacccagggcctctcacctgctagggagtgctct 383
Query: 184 tcctctgagccataactttagccataattgctatctatgccattattattgctatttaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcctctgagccataactttagccataattgctatctatgccattattattgctatttaat 443
Query: 244 tttctacaatggcctgctttattttaaaacatccctggaagcaaattgtgggaattcagt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttctacaatggcctgctttattttaaaacatccctggaagcaaattgtgggaattcagt 503
Query: 304 cgcaccctccctcgccggctcttcttatgaccataacctggggagggcagcagatgatgg 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 504 cgcaccctccctcgccggctcttcttatgaccataacctggggagggcagcagatggggg 563
Query: 364 aggacagcag 373
||| ||||||
Sbjct: 564 agggcagcag 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no548_o18.g1 MSMg01no548_o18.g1 CHROMAT_FILE:
MSMg01no548_o18.g1 PHD_FILE: MSMg01no548_o18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:59 2005
(557 letters)
>mm_chr1_91336419_91337376
Length = 958
Score = 886 bits (458), Expect = 0.0
Identities = 468/472 (99%), Gaps = 3/472 (0%)
Strand = Plus / Minus
Query: 1 attcctgttcctttccctc-aaaatcactttcctggcatccaacagtcttgactgtgcca 59
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 attcctgttcctttccctcaaaaatcactttcctggcatccaacagtcttgactgtgcca 411
Query: 60 ccactgtacactgcttgcctaatttttagaggcaggaagtcagatttttataaggtcaga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ccactgtacactgcttgcctaatttttagaggcaggaagtcagatttttataaggtcaga 351
Query: 120 tgttcccggcagggccagtgtgtgtggtttaagatggattaagaaacaaaaagactgctc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tgttcccggcagggccagtgtgtgtggtttaagatggattaagaaacaaaaagactgctc 291
Query: 180 actaatggtagagaaaggaccagggctctgtctaggaaactcccaaagctaatcacagac 239
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 actaatggtggagaaaggaccagggctctgtctaggaaactcccaaagctaatcacagac 231
Query: 240 aagactgcctgcactagccccctgactcagaccccagctcggatacatttgctacctgac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 aagactgcctgcactagccccctgactcagaccccagctcggatacatttgctacctgac 171
Query: 300 ttgtggggacttcacccttgttcaggcctcgggttctccatctgcaaaatggagccccta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ttgtggggacttcacccttgttcaggcctcgggttctccatctgcaaaatggagccccta 111
Query: 360 aaatcccaaccctgtataatactgtgatatttctggaaatggagcctctactaatccatc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 aaatcccaaccctgtataatactgtgatatttctggaaatggagcctctactaatccatc 51
Query: 420 agaacatagaaaaaaaaaaagtagttcccacacaggtgtaattgattaatgt 471
||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 agaacatag--aaaaaaaaagtagttcccacacaggtgtaattgattaatgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 958
Length adjustment: 10
Effective length of query: 547
Effective length of database: 948
Effective search space: 518556
Effective search space used: 518556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
