BAC Information

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BAC

Clone NameB6Ng01-003J14
Chromosome10 (Build37)
Map Location 98,693,292 - 98,845,166
singlet/doubletdoublet
Overlap geneDusp6, LOC100042222
Upstream geneEG667438, EG432494, Atp2b1, Wdr51b, Galnt4
Downstream geneGad1-ps, LOC100042232, LOC667502, Csl, LOC100042246, Kitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003J14.bB6Ng01-003J14.g
ACCDH841263DH841264
length63159
definitionDH841263|Mus musculus domesticus DNA, BAC clone: B6Ng01-003J14, 5' end.DH841264|Mus musculus domesticus DNA, BAC clone: B6Ng01-003J14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,693,292 - 98,693,922)(98,845,108 - 98,845,166)
sequence
gaattctagagatagatgagcctgactctaccactgtgttggctggctgt
gttagtgcaaacttgtgaaccattgggaccttgatgttcttttctataaa
actgttatagcaataacctatgaatgtggaaaagcagggtaaatgattag
atgagctagcctcatgaaactttgagcataccacttgactttatagtgta
tgttagaaaaacattagctcctgttggcaaaggcaagcagaaggttttgt
aatggtttctgtgatgtccatctcactcttgctaagacaatcaactttac
aaatccgaatgaatcaagaaaatgggtatgaaaggtagagaatgttttta
aagttctgtagactggtgtaaagagtatgtcggcaatatttttgctccta
atgtttttacatgaaacataaattagatgcatgtgtcctctttggtttac
tccctgtgacgacccatatatgaacaaagtatagtgaaaactccaatact
tccggagtagtctctgagtcatgcttcccccaaaatatatgtgaccaaca
aataataatttttgacaagtcatataatagtaaagtatgggtatgcgtgt
tcaatagggatgtgtgataatggggaggggt
attttttccagttctcctgaatacagttcgctttattcctttggtggggg
ggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_98693292_98693922
seq2: B6Ng01-003J14.b_42_672

seq1  GAATTCTAGAGATAGATGAGCCTGACTCTACCACTGTGTTGGCTGGCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAGATAGATGAGCCTGACTCTACCACTGTGTTGGCTGGCTGT  50

seq1  GTTAGTGCAAACTTGTGAACCATTGGGACCTTGATGTTCTTTTCTATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGCAAACTTGTGAACCATTGGGACCTTGATGTTCTTTTCTATAAA  100

seq1  ACTGTTATAGCAATAACCTATGAATGTGGAAAAGCAGGGTAAATGATTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTATAGCAATAACCTATGAATGTGGAAAAGCAGGGTAAATGATTAG  150

seq1  ATGAGCTAGCCTCATGAAACTTTGAGCATACCACTTGACTTTATAGTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTAGCCTCATGAAACTTTGAGCATACCACTTGACTTTATAGTGTA  200

seq1  TGTTAGAAAAACATTAGCTCCTGTTGGCAAAGGCAAGCAGAAGGTTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGAAAAACATTAGCTCCTGTTGGCAAAGGCAAGCAGAAGGTTTTGT  250

seq1  AATGGTTTCTGTGATGTCCATCTCACTCTTGCTAAGACAATCAACTTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTTCTGTGATGTCCATCTCACTCTTGCTAAGACAATCAACTTTAC  300

seq1  AAATCCGAATGAATCAAGAAAATGGGTATGAAAGGTAGAGAATGTTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCGAATGAATCAAGAAAATGGGTATGAAAGGTAGAGAATGTTTTTA  350

seq1  AAGTTCTGTAGACTGGTGTAAAGAGTATGTCGGCAATATTTTTGCTCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTGTAGACTGGTGTAAAGAGTATGTCGGCAATATTTTTGCTCCTA  400

seq1  ATGTTTTTACATGAAACATAAATTAGATGCATGTGTCCTCTTTGGTTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTTACATGAAACATAAATTAGATGCATGTGTCCTCTTTGGTTTAC  450

seq1  TCCCTGTGACGACCCATATATGAACAAAGTATAGTGAAAACTCCAATACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTGACGACCCATATATGAACAAAGTATAGTGAAAACTCCAATACT  500

seq1  TCCGGAGTAGTCTCTGAGTCATGCTTCCCCCAAAATATATGTGACCAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGAGTAGTCTCTGAGTCATGCTTCCCCCAAAATATATGTGACCAACA  550

seq1  AATAATAATTTTTGACAAGTCATATAATAGTAAAGTATGGGTATGCGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAATTTTTGACAAGTCATATAATAGTAAAGTATGGGTATGCGTGT  600

seq1  TCAATAGGGATGTGTGATAATGGGGAGGGGT  631
      |||||||||||||||||||||||||||||||
seq2  TCAATAGGGATGTGTGATAATGGGGAGGGGT  631

seq1: chr10_98845108_98845166
seq2: B6Ng01-003J14.g_74_132 (reverse)

seq1  CCCCCCCCCCCCCCCCCAAAGGAATAAAGCGAACTGTATTCAGGAGAACT  50
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCCCACCAAAGGAATAAAGCGAACTGTATTCAGGAGAACT  50

seq1  GGACAAAAT  59
      ||| |||||
seq2  GGAAAAAAT  59