BAC Information

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BAC

Clone NameB6Ng01-003O14
Chromosome10 (Build37)
Map Location 41,692,272 - 41,882,972
singlet/doubletdoublet
Overlap geneArmc2, 1700016J18Rik, LOC624784
Upstream geneGpr6, A530089I17Rik, LOC633979, Zbtb24, Mical1, Smpd2, Ppil6, Cd164, 5033413D22Rik, EG629461, 2410017P07Rik, Sesn1
Downstream geneFoxo3a, Lace1, LOC666540, Snx3, Nr2e1, c222389, Ostm1, Sec63, Scml4, EG666569, C230040G06, Sobp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003O14.bB6Ng01-003O14.g
ACCDH841477DH841478
length1,0061,067
definitionDH841477|Mus musculus domesticus DNA, BAC clone: B6Ng01-003O14, 5' end.DH841478|Mus musculus domesticus DNA, BAC clone: B6Ng01-003O14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,881,963 - 41,882,972)(41,692,272 - 41,693,327)
sequence
gaattcacccacactatgctatgcccctaggctaatggcacaaccttttg
ttcctagtctacaaacccaggtaacatgctactatattgaatactgtaga
caattataacatgattgcaatatatttattcatctaagcatatctaacag
aaaatatgtagtaaaaacactgtgataagaatttttagtatcattataat
ttaagaccacatcatatgtacattgttttataccacatgaatgtatatat
agtcctttttttttttaaaggagtttattgtttttttaatactgggactt
gaacccaagtcctcatacatgtcaggtaaccactctgccactaagctatg
acccacccctatatgcagtcttttaaaaatacttatttgtttttatttta
catctatgcatatttgcttgcatgtctgtaagtttactacatgcatgtgt
ggtatggagagggcagaagagaatgtctgatccctggaactgaagttaca
gacagctacgaactgtcatgtcagtcctgggaaccaaacccaggccctct
acaagaacagcaattctcttaacgcagagccatcttcccagcatgcactg
agacttttaagagaagaaccaaatgaaaacttagggcctaagaactcagt
agaagagcttaaaagtagattatatgcaagagaagagaaatttttataaa
cttgatgataggtcagaagaaaatatccagactttcctacaggatagtaa
ggttaatgtaaaatgaatttataattctattgagcccatatgaaagacac
ataattcaggtatttttatttacaagctataagtctagattgggcaggtt
tggagctattataacgtatttcctagacattatatgtgggaagccacatg
tgctggcgctggctaccgctggccaccacgcatacataggcagtaaagtt
tttttttttgccagaggagttttgagataaccaatcgatgagagacaagt
taacca
gaattcactctgtagaccaggctggccttgaacacatagagacccctctt
gcttctgcctctcacgtgctgggattaagccactacctcctggctatgtt
cctttcaaaatgactgtcaaccagggggagagacagtacaagccaccatt
accaaagaggagacttttaaacaaatgctgcttaggaaagagggaggcta
gaatattttgtttacagttgtgatcctgaagaaagtgatttttgagagtg
gcttaacagttggtacacaggaaagaaagccctctctcagagggcagcac
aagggggagaaaggaattcaaggtatagcgtgttctctttggaagggtta
cctctgacggacctcatcacaaaatgtagacgttgtaggccaatctgtaa
ataccataatgggagcttagctgcggacatgcaggaagtgtgcgccagca
aaaaggaagtgactcgggccatttttagctcttttcaacaataacatcta
agaaaaaaaaagttgaaacctcaacaactaaatacacgccaaagcctctc
ggttatgcacttaagtaaatgaacagttgggaagtgatggagacctcaat
ccgaggagagccggagctctacggggtgcattgctttggggtgttgctct
attcttctctgactggccttcacgcctgcaggctttgggctgtttctcag
ctgctgggctcaagtttacaaaggaagaggcaaggaaggttcaaggatca
aagcttcagctctggctccaggaagccctctgatactctgtatcagtcag
ctggctattccagttataaatgtcaccaggtggagcactgcactctggaa
gccgaggcagaaggatggcaagtttaaggtcagccctgggcttacatcct
gggagactctagaagtcaaagcaaaaacaaaacagaaggcacatggctca
gaagatcattataaggagctgaaacttatttagaagtttcagagtggatc
tagcgggagcaaagtcatcaagtaacttccaagttcatctcctttatcat
cacagggaaatgcagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_41881963_41882972
seq2: B6Ng01-003O14.b_49_1054 (reverse)

seq1  TGGTTAACTTGTCTCTCATCTGATTGGTTAATCCTCAAAACCTCATCTTG  50
      |||||||||||||||||||| |||||||||   ||||||| ||| ||| |
seq2  TGGTTAACTTGTCTCTCATC-GATTGGTTA--TCTCAAAA-CTCCTCTGG  46

seq1  GCAAAAAAAAAACTTTACTGCCTATGTATGCGTGGTGGCCAGCGGTAGCC  100
        ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAAAAACTTTACTGCCTATGTATGCGTGGTGGCCAGCGGTAGCC  96

seq1  AGCGCCAGCACATGTGGCTTCCCACATATTATGTCTAGGAAATACGTTAT  150
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGCGCCAGCACATGTGGCTTCCCACATATAATGTCTAGGAAATACGTTAT  146

seq1  AATAGCTCCAAACCTGCCCAATCTAGACTTATAGCTTGTAAATAAAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTCCAAACCTGCCCAATCTAGACTTATAGCTTGTAAATAAAAATA  196

seq1  CCTGAATTATGTGTCTTTCATATGGGCTCAATAGAATTATAAATTCATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATTATGTGTCTTTCATATGGGCTCAATAGAATTATAAATTCATTT  246

seq1  TACATTAACCTTACTATCCTGTAGGAAAGTCTGGATATTTTCTTCTGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTAACCTTACTATCCTGTAGGAAAGTCTGGATATTTTCTTCTGACC  296

seq1  TATCATCAAGTTTATAAAAATTTCTCTTCTCTTGCATATAATCTACTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCAAGTTTATAAAAATTTCTCTTCTCTTGCATATAATCTACTTTT  346

seq1  AAGCTCTTCTACTGAGTTCTTAGGCCCTAAGTTTTCATTTGGTTCTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTTCTACTGAGTTCTTAGGCCCTAAGTTTTCATTTGGTTCTTCTC  396

seq1  TTAAAAGTCTCAGTGCATGCTGGGAAGATGGCTCTGCGTTAAGAGAATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGTCTCAGTGCATGCTGGGAAGATGGCTCTGCGTTAAGAGAATTG  446

seq1  CTGTTCTTGTAGAGGGCCTGGGTTTGGTTCCCAGGACTGACATGACAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTTGTAGAGGGCCTGGGTTTGGTTCCCAGGACTGACATGACAGTT  496

seq1  CGTAGCTGTCTGTAACTTCAGTTCCAGGGATCAGACATTCTCTTCTGCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGCTGTCTGTAACTTCAGTTCCAGGGATCAGACATTCTCTTCTGCCC  546

seq1  TCTCCATACCACACATGCATGTAGTAAACTTACAGACATGCAAGCAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATACCACACATGCATGTAGTAAACTTACAGACATGCAAGCAAATA  596

seq1  TGCATAGATGTAAAATAAAAACAAATAAGTATTTTTAAAAGACTGCATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAGATGTAAAATAAAAACAAATAAGTATTTTTAAAAGACTGCATAT  646

seq1  AGGGGTGGGTCATAGCTTAGTGGCAGAGTGGTTACCTGACATGTATGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTGGGTCATAGCTTAGTGGCAGAGTGGTTACCTGACATGTATGAGG  696

seq1  ACTTGGGTTCAAGTCCCAGTATTAAAAAAACAATAAACTCCTTTAAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGGTTCAAGTCCCAGTATTAAAAAAACAATAAACTCCTTTAAAAAA  746

seq1  AAAAAGGACTATATATACATTCATGTGGTATAAAACAATGTACATATGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGACTATATATACATTCATGTGGTATAAAACAATGTACATATGAT  796

seq1  GTGGTCTTAAATTATAATGATACTAAAAATTCTTATCACAGTGTTTTTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTTAAATTATAATGATACTAAAAATTCTTATCACAGTGTTTTTAC  846

seq1  TACATATTTTCTGTTAGATATGCTTAGATGAATAAATATATTGCAATCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTTTCTGTTAGATATGCTTAGATGAATAAATATATTGCAATCAT  896

seq1  GTTATAATTGTCTACAGTATTCAATATAGTAGCATGTTACCTGGGTTTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAATTGTCTACAGTATTCAATATAGTAGCATGTTACCTGGGTTTGT  946

seq1  AGACTAGGAACAAAAGGTTGTGCCATTAGCCTAGGGGCATAGCATAGTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAGGAACAAAAGGTTGTGCCATTAGCCTAGGGGCATAGCATAGTGT  996

seq1  GGGTGAATTC  1010
      ||||||||||
seq2  GGGTGAATTC  1006

seq1: chr10_41692272_41693327
seq2: B6Ng01-003O14.g_67_1133

seq1  GAATTCACTCTGTAGACCAGGCTGGCCTTGAACACATAGAGACCCCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTGGCCTTGAACACATAGAGACCCCTCTT  50

seq1  GCTTCTGCCTCTCACGTGCTGGGATTAAGCCACTACCTCCTGGCTATGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGCCTCTCACGTGCTGGGATTAAGCCACTACCTCCTGGCTATGTT  100

seq1  CCTTTCAAAATGACTGTCAACCAGGGGGAGAGACAGTACAAGCCACCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCAAAATGACTGTCAACCAGGGGGAGAGACAGTACAAGCCACCATT  150

seq1  ACCAAAGAGGAGACTTTTAAACAAATGCTGCTTAGGAAAGAGGGAGGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGAGGAGACTTTTAAACAAATGCTGCTTAGGAAAGAGGGAGGCTA  200

seq1  GAATATTTTGTTTACAGTTGTGATCCTGAAGAAAGTGATTTTTGAGAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTTGTTTACAGTTGTGATCCTGAAGAAAGTGATTTTTGAGAGTG  250

seq1  GCTTAACAGTTGGTACACAGGAAAGAAAGCCCTCTCTCAGAGGGCAGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAACAGTTGGTACACAGGAAAGAAAGCCCTCTCTCAGAGGGCAGCAC  300

seq1  AAGGGGGAGAAAGGAATTCAAGGTATAGCGTGTTCTCTTTGGAAGGGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGGAGAAAGGAATTCAAGGTATAGCGTGTTCTCTTTGGAAGGGTTA  350

seq1  CCTCTGACGGACCTCATCACAAAATGTAGACGTTGTAGGCCAATCTGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGACGGACCTCATCACAAAATGTAGACGTTGTAGGCCAATCTGTAA  400

seq1  ATACCATAATGGGAGCTTAGCTGCGGACATGCAGGAAGTGTGCGCCAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATAATGGGAGCTTAGCTGCGGACATGCAGGAAGTGTGCGCCAGCA  450

seq1  AAAAGGAAGTGACTCGGGCCATTTTTAGCTCTTTTCAACAATAACATCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAGTGACTCGGGCCATTTTTAGCTCTTTTCAACAATAACATCTA  500

seq1  AGAAAAAAAAAGTTGAAACCTCAACAACTAAATACACGCCAAAGCCTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAAAAGTTGAAACCTCAACAACTAAATACACGCCAAAGCCTCTC  550

seq1  GGTTATGCACTTAAGTAAATGAACAGTTGGGAAGTGATGGAGACCCCAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||| ||| 
seq2  GGTTATGCACTTAAGTAAATGAACAGTTGGGAAGTGATGGAGACCTCAAT  600

seq1  CCGAGGAGAGCCGGAGCTCTACGGGGTGCATTGCTTTGGGGTGTTGCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGGAGAGCCGGAGCTCTACGGGGTGCATTGCTTTGGGGTGTTGCTCT  650

seq1  ATTCTTCTCTGACTGGCCTTCACGCCTGCAGGCTTTGGGCTG-TTCTCAG  699
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATTCTTCTCTGACTGGCCTTCACGCCTGCAGGCTTTGGGCTGTTTCTCAG  700

seq1  CTGCTGGGCTCAAGTTTACAAAGGAAGAGGCAAGGAAGGTTCAAGGATCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGGCTCAAGTTTACAAAGGAAGAGGCAAGGAAGGTTCAAGGATCA  750

seq1  AAGCTTCAGCTCTGGCTCCAGGAAGCCCTCTGATACTCTGTATCAGTCAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCAGCTCTGGCTCCAGGAAGCCCTCTGATACTCTGTATCAGTCAG  800

seq1  CTGGCTATTCCAGTTATAAATGCCACCAGGTGGAGCACTGCACTCTGGAA  849
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTGGCTATTCCAGTTATAAATGTCACCAGGTGGAGCACTGCACTCTGGAA  850

seq1  GCCGAGGCAGAAGGATGGCAAGTTTAAGGTCAG-CCTGGGC-TACATC--  895
      ||||||||||||||||||||||||||||||||| ||||||| ||||||  
seq2  GCCGAGGCAGAAGGATGGCAAGTTTAAGGTCAGCCCTGGGCTTACATCCT  900

seq1  TGGAGACTCAAGAAGTCAAAGC-AAAACAAAACAGAAAGGCACATGGCCA  944
       |||||||| |||||||||||| |||||||||||| ||||||||||| | 
seq2  GGGAGACTCTAGAAGTCAAAGCAAAAACAAAACAG-AAGGCACATGG-CT  948

seq1  CAGAAGA-CATTATAA-GAGCTGAAAC-TAGTTAAGAGTTTCAAGAGT-G  990
      ||||||| |||||||| |||||||||| || |||  |||||| ||||| |
seq2  CAGAAGATCATTATAAGGAGCTGAAACTTATTTAGAAGTTTC-AGAGTGG  997

seq1  ATCTAGC-GGAGCAAAGTCACCAAGTAACTTCCAAG-TCA-CCCCTTAAC  1037
      ||||||| |||||||||||| ||||||||||||||| ||| | |||| | 
seq2  ATCTAGCGGGAGCAAAGTCATCAAGTAACTTCCAAGTTCATCTCCTTTAT  1047

seq1  CA-CACAGGGAAATGCAGCC  1056
      || |||||||||||||||||
seq2  CATCACAGGGAAATGCAGCC  1067