BAC Information

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BAC

Clone NameB6Ng01-006C09
Chromosome10 (Build37)
Map Location 59,735,042 - 59,735,563
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC664892, P4ha1, LOC100039174, Pla2g12b, Oit3, Ccdc109a, LOC100039225, Cbara1, EG664907, LOC664936, Dnajb12, Ddit4, D10Ertd641e, Ascc1, Spock2, Chst3, LOC100039080
Downstream genePsap, Cdh23, 4632428N05Rik, Slc29a3, Unc5b, Pcbd1, Sgpl1, 1700021K02Rik, Adamts14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006C09.bB6Ng01-006C09.g
ACCDH843090DH843091
length522163
definitionDH843090|Mus musculus domesticus DNA, BAC clone: B6Ng01-006C09, 5' end.DH843091|Mus musculus domesticus DNA, BAC clone: B6Ng01-006C09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttgatctgggcattaggcattaagagctataaagtccttgag
gccttttgcccggtcaaactgctctaggaacccctggggaagcaagcatt
cattggaagtgttcacaaagggctctttatgagaggcatgggacccaaaa
ggatcccagtggctgaagggtgctggggtggtaaggaaacagggctggta
agaacaatgcacagaaatggtgtacaagaggcagacgtagcaagactggt
gtgtgtagccagcctgcaaggtaatatgattaccttacaaagctctgtta
agagtcagccctcccagacttcccatggtgccaagcagagctggccaaga
ggccatgctgtagtaccttctgtgaaatgcagggttcgtggttttgagat
agggtctggtctccttatgtgcttcaggctagtctggaacttatcatcct
accaaacattgggcaagcacctcctgatatttcaacaactggcgtgggcg
tgcacgggggtgggtggggggt
agtccctgaaaccacagtaggagagaactggctcctataagttatcctct
gacccacacgtatcttgggcacacacatgtccacaccccagcacacacaa
tactaataaataaactattttatttatgaggggaggaggaagaagagaag
agaagagaagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_59735042_59735563
seq2: B6Ng01-006C09.b_43_564 (reverse)

seq1  ACCCCCCACCCACCCCCGTGCACGCCCACGCCAGTTGTTGAAATATCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCCACCCACCCCCGTGCACGCCCACGCCAGTTGTTGAAATATCAGG  50

seq1  AGGTGCTTGCCCAATGTTTGGTAGGATGATAAGTTCCAGACTAGCCTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCTTGCCCAATGTTTGGTAGGATGATAAGTTCCAGACTAGCCTGAA  100

seq1  GCACATAAGGAGACCAGACCCTATCTCAAAACCACGAACCCTGCATTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATAAGGAGACCAGACCCTATCTCAAAACCACGAACCCTGCATTTCA  150

seq1  CAGAAGGTACTACAGCATGGCCTCTTGGCCAGCTCTGCTTGGCACCATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGTACTACAGCATGGCCTCTTGGCCAGCTCTGCTTGGCACCATGG  200

seq1  GAAGTCTGGGAGGGCTGACTCTTAACAGAGCTTTGTAAGGTAATCATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTGGGAGGGCTGACTCTTAACAGAGCTTTGTAAGGTAATCATATT  250

seq1  ACCTTGCAGGCTGGCTACACACACCAGTCTTGCTACGTCTGCCTCTTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGCAGGCTGGCTACACACACCAGTCTTGCTACGTCTGCCTCTTGTA  300

seq1  CACCATTTCTGTGCATTGTTCTTACCAGCCCTGTTTCCTTACCACCCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTTCTGTGCATTGTTCTTACCAGCCCTGTTTCCTTACCACCCCAG  350

seq1  CACCCTTCAGCCACTGGGATCCTTTTGGGTCCCATGCCTCTCATAAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTTCAGCCACTGGGATCCTTTTGGGTCCCATGCCTCTCATAAAGAG  400

seq1  CCCTTTGTGAACACTTCCAATGAATGCTTGCTTCCCCAGGGGTTCCTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGTGAACACTTCCAATGAATGCTTGCTTCCCCAGGGGTTCCTAGA  450

seq1  GCAGTTTGACCGGGCAAAAGGCCTCAAGGACTTTATAGCTCTTAATGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTGACCGGGCAAAAGGCCTCAAGGACTTTATAGCTCTTAATGCCT  500

seq1  AATGCCCAGATCAAGAGAATTC  522
      ||||||||||||||||||||||
seq2  AATGCCCAGATCAAGAGAATTC  522