BAC Information

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BAC

Clone NameB6Ng01-009F18
Chromosome10 (Build37)
Map Location 102,531,775 - 102,532,691
singlet/doubletsinglet
Overlap geneLrriq1
Upstream geneMgat4c, LOC667652, Nts, Pamci, LOC382413, Cart1
Downstream geneLOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009F18.bB6Ng01-009F18.g
ACCDH845322DH845323
length917650
definitionDH845322|Mus musculus domesticus DNA, BAC clone: B6Ng01-009F18, 5' end.DH845323|Mus musculus domesticus DNA, BAC clone: B6Ng01-009F18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattctgttaccaggctggccttgaactcagaaatcagcatgcct
ctccctctccagtgctggaattaaagacgtacgccaccatatttttttta
agacatggtcttttgctgggcatggtggcgcgtgcctttaatcccagcac
ttgggaggcagaggcaggcaaatttttgagttcaaggctatcctggtcta
caaagtgagttccaggacagccagggctacacagagaaaagatatggtct
tttgttagactgggaataactggcttaggcaaagttgtctgttcaaaaaa
gcttagggatccttctatactcccagctctcatcaccacagctctgtgat
tctaaacattgaccagcatgcctgaagttctcgtgcttgcatggcaagct
ctttagttacttgtctttctctgtaacttccaaagactaaatttattgaa
aataaatatatcagtattctgatcaaattaaacttgactataaatattaa
tggtgcacactaaacatggtagaacattaaaggtagaaaactttgcagtc
tcaagtgaaattttatggctgtaaaaattaagagtgatgatacaggcttg
agatcacagtatttggaggaacagacaattggagcaggaggtcaaccttg
tccttgactacatggtgactttgagtccagcctgggctgtatcacttctc
tttcaacgagccaaagaaaaaggaggaataggaaataaatctaatttaaa
tacacttagtttttctaaaatttgataactcttactgttaatactttcag
atttctgttcattgatgtctatattttcaaatgatagtttcgaagtatta
tttagaaattatatttgtaaaaattaatatataatagaggaaatacatgt
gtgtataatgtgtgtgt

gaattcctctttccatatctttgaagaattgtgttgggattttgatgggg
attgcattgaatctatagattgcctttggtaggatggccatttttactat
gttaattcatgagcatgggaaacctctgacccataattgttcctctctga
aaaaattacagggagggaaatggagaggagcctgaggtaaagaaggtcca
gccacaggcccaaagtgggatccagctcaaggggaggtcccaaggcctga
cactattactgaggctatggagtgctcacaaaaaagatctatcatgactg
ccctccaaaagacccaacaagcaactgaaagagtcagaggcagacatttg
cacccaacaaatggccagaagcatctgacccctgttgttgaattaaggaa
ggcttaaataagctgaggagagggcgaccctgtaggaggaccagcagtct
taattaatctggatccccaagatctttcaaacactgacctaccaaccagc
cagcatataccagctgatatgaggcccccaacacacatgcagtagaggac
tgctgggtctgtgttcattcagagatgatgcaccttaccaaaagatacag
gaggccccagggagtttagaggtcaggtgaggtgggggttggggggaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_102531775_102532691
seq2: B6Ng01-009F18.b_46_962 (reverse)

seq1  ACACACACATTATACACACATGTATTTCCTCTATTATATATTAATTTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACATTATACACACATGTATTTCCTCTATTATATATTAATTTTTA  50

seq1  CAAATATAATTTCTAAATAATACTTCGAAACTATCATTTGAAAATATAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATAATTTCTAAATAATACTTCGAAACTATCATTTGAAAATATAGA  100

seq1  CATCAATGAACAGAAATCTGAAAGTATTAACAGTAAGAGTTATCAAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATGAACAGAAATCTGAAAGTATTAACAGTAAGAGTTATCAAATTT  150

seq1  TAGAAAAACTAAGTGTATTTAAATTAGATTTATTTCCTATTCCTCCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAACTAAGTGTATTTAAATTAGATTTATTTCCTATTCCTCCTTTT  200

seq1  TCTTTGGCTCGTTGAAAGAGAAGTGATACAGCCCAGGCTGGACTCAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGCTCGTTGAAAGAGAAGTGATACAGCCCAGGCTGGACTCAAAGT  250

seq1  CACCATGTAGTCAAGGACAAGGTTGACCTCCTGCTCCAATTGTCTGTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGTAGTCAAGGACAAGGTTGACCTCCTGCTCCAATTGTCTGTTCC  300

seq1  TCCAAATACTGTGATCTCAAGCCTGTATCATCACTCTTAATTTTTACAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATACTGTGATCTCAAGCCTGTATCATCACTCTTAATTTTTACAGC  350

seq1  CATAAAATTTCACTTGAGACTGCAAAGTTTTCTACCTTTAATGTTCTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAATTTCACTTGAGACTGCAAAGTTTTCTACCTTTAATGTTCTACC  400

seq1  ATGTTTAGTGTGCACCATTAATATTTATAGTCAAGTTTAATTTGATCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAGTGTGCACCATTAATATTTATAGTCAAGTTTAATTTGATCAGA  450

seq1  ATACTGATATATTTATTTTCAATAAATTTAGTCTTTGGAAGTTACAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGATATATTTATTTTCAATAAATTTAGTCTTTGGAAGTTACAGAGA  500

seq1  AAGACAAGTAACTAAAGAGCTTGCCATGCAAGCACGAGAACTTCAGGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAGTAACTAAAGAGCTTGCCATGCAAGCACGAGAACTTCAGGCAT  550

seq1  GCTGGTCAATGTTTAGAATCACAGAGCTGTGGTGATGAGAGCTGGGAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTCAATGTTTAGAATCACAGAGCTGTGGTGATGAGAGCTGGGAGTA  600

seq1  TAGAAGGATCCCTAAGCTTTTTTGAACAGACAACTTTGCCTAAGCCAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGATCCCTAAGCTTTTTTGAACAGACAACTTTGCCTAAGCCAGTT  650

seq1  ATTCCCAGTCTAACAAAAGACCATATCTTTTCTCTGTGTAGCCCTGGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAGTCTAACAAAAGACCATATCTTTTCTCTGTGTAGCCCTGGCTG  700

seq1  TCCTGGAACTCACTTTGTAGACCAGGATAGCCTTGAACTCAAAAATTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAACTCACTTTGTAGACCAGGATAGCCTTGAACTCAAAAATTTGC  750

seq1  CTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCACGCGCCACCATGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCACGCGCCACCATGCCC  800

seq1  AGCAAAAGACCATGTCTTAAAAAAAATATGGTGGCGTACGTCTTTAATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAGACCATGTCTTAAAAAAAATATGGTGGCGTACGTCTTTAATTC  850

seq1  CAGCACTGGAGAGGGAGAGGCATGCTGATTTCTGAGTTCAAGGCCAGCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTGGAGAGGGAGAGGCATGCTGATTTCTGAGTTCAAGGCCAGCCT  900

seq1  GGTAACAGAATGAATTC  917
      |||||||||||||||||
seq2  GGTAACAGAATGAATTC  917


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